Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RPL26P28-201ENST00000451325 435 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 HMGN3P1-201ENST00000453847 193 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 SUMO2P2-201ENST00000456482 255 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 RNA5SP269-201ENST00000459032 137 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 CYCSP29-201ENST00000533731 318 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 CYCSP28-201ENST00000534284 321 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC012414.6-201ENST00000568241 401 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC010546.1-201ENST00000569391 485 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 HMGB2P1-201ENST00000591146 634 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 VN1R85P-201ENST00000601587 426 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 PSMA6P4-201ENST00000603247 718 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AL136363.2-201ENST00000604173 851 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC005332.10-201ENST00000612725 619 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC010678.1-201ENST00000614118 713 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSX2IPQ9Y2D8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RNU6-660P-201ENST00000364566 109 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RNU6-1119P-201ENST00000384349 108 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 Y_RNA.517-201ENST00000384551 106 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 MTCO3P31-201ENST00000405526 789 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RPS3AP54-201ENST00000435535 734 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 TDGF1P1-201ENST00000445734 527 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RPL23AP15-201ENST00000450202 459 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 MTCYBP1-201ENST00000454315 1119 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 DHFRP3-201ENST00000455595 559 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC010469.1-201ENST00000463864 576 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RPS4XP15-201ENST00000489210 795 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 RN7SL812P-201ENST00000493791 279 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC025445.1-201ENST00000502728 300 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC109458.1-201ENST00000508858 316 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC069240.1-201ENST00000548774 375 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC025884.1-201ENST00000556034 378 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 PCMTD1P2-201ENST00000565017 355 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC087683.1-201ENST00000591187 441 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AL021997.1-201ENST00000605757 193 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC239868.4-201ENST00000608318 671 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC015813.4-201ENST00000610469 179 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC099842.1-201ENST00000619919 596 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC018816.2-201ENST00000621460 353 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 AC140479.6-201ENST00000633535 357 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 MIR492-201ENST00000638676 116 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 CR383658.2-201ENST00000547576 1525 ntBASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX2IPQ9Y2D8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RNU1-130P-201ENST00000363930 160 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RNU1-64P-201ENST00000365443 163 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms