Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC112200.1-201ENST00000625015 234 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 SNORA50A-202ENST00000629536 136 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC234772.1-201ENST00000377927 937 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 MIR218-2-201ENST00000385006 110 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 DNAJC19P6-201ENST00000401853 280 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 PRRC2CP1-201ENST00000404428 159 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RSL24D1P1-201ENST00000404972 493 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 HSPE1P26-201ENST00000405341 275 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-77P-201ENST00000410554 91 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RPL23AP82-202ENST00000427528 469 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC008065.1-201ENST00000428525 348 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AL050321.1-201ENST00000432363 400 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AL050341.1-201ENST00000447743 313 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 FTH1P2-201ENST00000466086 412 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RPS17P11-201ENST00000474297 293 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC006499.5-201ENST00000505037 514 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 NAMPTP2-201ENST00000505629 1115 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 POU5F1P7-201ENST00000508759 541 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC005921.1-201ENST00000510589 286 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 PRELID3BP4-201ENST00000515476 571 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 SNORA70.18-201ENST00000516696 98 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 RN7SKP234-201ENST00000517173 224 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 HIGD1AP10-201ENST00000527837 282 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC124293.1-201ENST00000530034 493 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC023824.3-201ENST00000569003 562 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 MIR4789-201ENST00000577469 82 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 MIR3158-1-201ENST00000583596 81 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 AP001148.1-201ENST00000624124 2359 ntBASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAPPC4Q9Y296 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-1293P-201ENST00000384077 107 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-356P-201ENST00000384140 107 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 DBIP2-201ENST00000419076 262 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RPL37P1-201ENST00000432310 284 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC073063.1-201ENST00000434352 607 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RPS7P2-201ENST00000435134 607 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 HMGB1P45-201ENST00000435986 653 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC000041.1-201ENST00000439655 175 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 Z95327.1-201ENST00000446082 482 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 CDC42P1-201ENST00000456658 548 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC078918.1-201ENST00000498515 228 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC090071.1-201ENST00000507713 644 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 PTGES3P3-201ENST00000511479 482 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 IGJP1-201ENST00000522682 475 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms