Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.81□□□□□ -1.32
ZC3H4Q9UPT8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 MTND5P10-201ENST00000603719 1809 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 RNU6-1252P-201ENST00000363054 104 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 Y_RNA.148-201ENST00000363557 117 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 Y_RNA.149-201ENST00000363558 117 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 MIR454-201ENST00000390180 115 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 MIR548K-201ENST00000408406 116 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 C4BPAP2-201ENST00000428434 478 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC093156.1-201ENST00000440382 670 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AL049714.1-201ENST00000466686 347 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 RN7SL591P-201ENST00000496150 292 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC025164.1-201ENST00000496249 478 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 HMGB1P40-201ENST00000525121 540 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 MIR4790-201ENST00000577799 79 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC113194.1-201ENST00000606037 500 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC022893.3-201ENST00000607665 437 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC007546.1-201ENST00000619452 559 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC022418.1-201ENST00000624118 445 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC134882.1-201ENST00000603738 1676 ntBASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZC3H4Q9UPT8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 SNORA62-201ENST00000365493 153 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RNY3P13-201ENST00000365542 102 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 SNORA51.8-201ENST00000384234 132 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AL121834.1-202ENST00000404494 277 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RPS16P5-201ENST00000406501 404 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 OR6C66P-201ENST00000414917 930 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RPL36P19-201ENST00000430744 301 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 NANOGP10-201ENST00000453325 895 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RNU1-88P-201ENST00000459274 128 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 MIR2053-201ENST00000459295 91 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC091153.1-201ENST00000466297 402 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AP000893.1-201ENST00000474462 794 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RNU6-1088P-201ENST00000516850 104 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RN7SKP147-201ENST00000517154 244 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC009902.1-201ENST00000519351 183 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC053481.3-201ENST00000577881 843 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 MIR4680-201ENST00000580906 66 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC123786.2-201ENST00000603459 275 ntBASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.79□□□□□ -1.32
ZC3H4Q9UPT8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms