Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 RNU1-140P-201ENST00000365040 165 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 SNORD67-201ENST00000390833 111 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 RPL5P18-201ENST00000406671 891 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AL583834.1-201ENST00000406943 343 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC004022.2-201ENST00000413824 193 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 MTCYBP12-201ENST00000440559 1134 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 NANOGNBP1-201ENST00000448444 480 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 PTGES3P5-201ENST00000455109 434 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AP002884.2-201ENST00000471647 395 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 RPL30P11-201ENST00000495304 339 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC113192.3-201ENST00000529152 742 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC007998.5-201ENST00000622938 237 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC138649.5-201ENST00000637456 137 ntBASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL353678.1-201ENST00000422735 741 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC011242.1-201ENST00000433596 1158 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL157827.1-201ENST00000447622 132 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 RSL24D1P3-201ENST00000449255 495 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 UQCRHP3-201ENST00000451503 251 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 RN7SL863P-201ENST00000462370 296 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 RN7SL20P-201ENST00000488827 297 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC010486.1-201ENST00000511793 424 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 UBL5P2-201ENST00000583788 219 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 LLPHP1-201ENST00000603571 367 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 AL359715.4-201ENST00000606629 1436 ntBASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPF3BQ9BZI7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 OR1S2-201ENST00000302592 978 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 MIR591-201ENST00000385290 95 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AL138885.1-201ENST00000405921 675 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 RNU4-47P-201ENST00000410876 114 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 CBX1P4-201ENST00000439415 457 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 RPS20P32-201ENST00000456044 356 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AC092185.1-201ENST00000491371 97 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 AC107294.3-201ENST00000609211 526 ntBASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF3BQ9BZI7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AC073325.2-201ENST00000339545 159 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 MIR422A-201ENST00000362286 90 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 SNORA70E-201ENST00000384492 135 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AL031121.1-201ENST00000406553 254 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AL031736.2-201ENST00000426573 787 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 OR2AS1P-201ENST00000427827 319 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 RPL32P28-201ENST00000443577 397 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 RPL7P59-201ENST00000447700 943 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 PRELID3BP6-201ENST00000503839 571 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 MTATP6P22-201ENST00000507369 598 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AC010265.1-201ENST00000513509 211 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 AC013412.1-201ENST00000610687 192 ntBASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPF3BQ9BZI7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
UPF3BQ9BZI7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms