Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 UBE2WP1-201ENST00000362030 340 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MIR412-201ENST00000362142 91 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 Y_RNA.308-201ENST00000365043 101 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RN7SKP269-201ENST00000365545 319 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SNORD20-201ENST00000384550 80 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CES5AP1-201ENST00000400418 859 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RNU5A-5P-201ENST00000411054 116 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC099336.2-201ENST00000422457 254 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC099677.3-201ENST00000427081 395 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC008065.1-201ENST00000428525 348 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC126120.1-201ENST00000431082 470 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL358472.1-201ENST00000431295 329 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RPS20P1-201ENST00000434853 354 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL604028.2-201ENST00000437848 788 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RPSAP49-201ENST00000445182 886 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC005077.1-201ENST00000449226 375 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AP006222.1-205ENST00000450734 457 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC099560.2-201ENST00000457554 255 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TOMM22P6-201ENST00000465035 409 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RN7SL189P-201ENST00000468631 289 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RN7SL688P-201ENST00000471754 275 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC007998.1-201ENST00000474156 672 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RPL23AP45-201ENST00000476406 468 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RN7SL306P-201ENST00000492941 296 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 OR7H2P-201ENST00000513483 306 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AP006587.2-201ENST00000530696 493 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AP006587.5-201ENST00000532033 739 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MIR4301-201ENST00000577203 66 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RPL7P50-201ENST00000600588 727 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SRGNP1-201ENST00000603392 451 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MIR6872-201ENST00000612981 62 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AL451142.2-201ENST00000429076 2090 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 MAPK10-261ENST00000641050 3109 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 Y_RNA.273-201ENST00000364703 102 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 Y_RNA.286-201ENST00000364813 102 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 RNA5SP396-201ENST00000364834 120 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 RNU4-9P-201ENST00000364951 139 ntBASIC3.51□□□□□ -1.85
KRTAP3-1Q9BYR8 RNU6-215P-201ENST00000365169 102 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms