Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC008121.3-201ENST00000618726 433 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC009248.2-201ENST00000619826 254 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 GVINP1-202ENST00000531871 7271 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AL512646.1-201ENST00000269395 1077 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 Y_RNA.46-201ENST00000362695 102 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-359P-201ENST00000365466 108 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 SNORA20.2-201ENST00000383922 131 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-952P-201ENST00000391164 108 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RN7SKP114-201ENST00000410327 279 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 VN1R36P-201ENST00000414936 291 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 HMGB3P10-201ENST00000434734 572 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC236972.2-201ENST00000434979 310 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RPS26P40-201ENST00000435209 294 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RPL5P25-201ENST00000441148 775 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 IGLV2-34-201ENST00000490007 283 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 TMEM251P1-201ENST00000503717 318 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC006427.1-201ENST00000514359 712 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-277P-201ENST00000516272 106 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 OR5M2P-201ENST00000529003 936 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC021006.3-201ENST00000530771 192 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC023050.3-201ENST00000541142 333 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AL109766.1-201ENST00000555080 552 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC122134.1-201ENST00000565664 1104 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 MIR4675-201ENST00000577898 77 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC006504.6-201ENST00000590142 199 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AL162431.4-201ENST00000604674 411 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 AC078899.5-201ENST00000612475 178 ntBASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNGAP1Q96PV0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 Y_RNA.216-201ENST00000364205 93 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RNA5SP187-201ENST00000384400 119 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC009161.1-201ENST00000417306 376 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC010881.1-201ENST00000433830 235 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AL161722.2-201ENST00000434731 981 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RSU1P2-202ENST00000437884 485 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RPL34P20-201ENST00000442771 351 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RPS20P32-201ENST00000456044 356 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 Y_RNA.632-201ENST00000459189 102 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-261P-201ENST00000459506 102 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RPS15AP17-201ENST00000470598 390 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC140172.1-201ENST00000502928 141 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 COX6B1P5-201ENST00000509843 249 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC108471.1-201ENST00000513977 287 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 HMGN1P9-201ENST00000515212 298 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-835P-201ENST00000516974 104 ntBASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNGAP1Q96PV0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms