Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RN7SKP82-201ENST00000516786 223 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL049839.1-201ENST00000556151 657 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 RN7SL802P-201ENST00000577858 299 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 MTND1P15-201ENST00000579262 949 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AP001004.1-201ENST00000582468 324 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 BNIP3P11-201ENST00000603878 563 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL021997.1-201ENST00000605757 193 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC100793.4-201ENST00000613683 429 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC073968.1-201ENST00000618594 637 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AP000346.3-201ENST00000622821 210 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 MTND5P29-201ENST00000458676 1807 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 RNU5F-6P-201ENST00000362979 116 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC016769.3-201ENST00000396562 315 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 EIF5P1-201ENST00000400019 1231 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 DHFRP6-201ENST00000401776 268 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 RNU2-21P-201ENST00000410368 188 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 Z74021.1-201ENST00000423610 407 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC023347.2-201ENST00000433994 462 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL831737.1-201ENST00000441288 271 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 RPL5P32-201ENST00000454085 879 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 snoU13.1-201ENST00000459157 104 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC087879.1-201ENST00000474343 374 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC025164.1-201ENST00000496249 478 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC104986.1-201ENST00000517978 436 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC100770.1-201ENST00000532310 322 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL110118.1-201ENST00000553543 400 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 ZNF415P1-201ENST00000582279 1166 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 MIR4637-201ENST00000582405 84 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 MAGOH2P-202ENST00000584384 429 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC067852.4-201ENST00000590314 478 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC025946.2-201ENST00000603398 234 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC015871.2-201ENST00000603605 948 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL590240.3-201ENST00000621416 943 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 U6.101-201ENST00000637707 76 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS50Q96JG6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 AL442639.1-201ENST00000625030 1899 ntBASIC4.47□□□□□ -1.69
VPS50Q96JG6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS50Q96JG6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS50Q96JG6 DHX40P1-201ENST00000588725 1412 ntBASIC4.46□□□□□ -1.69
VPS50Q96JG6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
VPS50Q96JG6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS50Q96JG6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS50Q96JG6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 RNU5F-7P-201ENST00000363696 115 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 Y_RNA.517-201ENST00000384551 106 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC109780.2-201ENST00000413467 845 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC004022.2-201ENST00000413824 193 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 HMGB1P11-201ENST00000413899 637 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC083875.1-201ENST00000419509 405 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms