Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC100770.1-201ENST00000532310 322 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC135001.1-201ENST00000544546 283 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL352979.3-201ENST00000553515 247 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 PCMTD1P2-201ENST00000565017 355 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 RPL23AP97-201ENST00000568955 471 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AP001004.1-201ENST00000582468 324 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC022146.1-201ENST00000595307 847 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC079587.1-201ENST00000603846 277 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC009237.17-201ENST00000618111 748 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AP000346.3-201ENST00000622821 210 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 MTCO1P23-201ENST00000415223 1526 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL136964.1-201ENST00000622038 2990 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 OR5P1P-201ENST00000299512 925 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RN7SKP44-201ENST00000363602 316 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RNU5F-7P-201ENST00000363696 115 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RNU6-501P-201ENST00000364072 100 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 LAP3P1-201ENST00000403648 294 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MIR1911-201ENST00000410783 80 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 OR8G2P-201ENST00000412796 908 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC016769.2-201ENST00000414815 475 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RPEP2-201ENST00000432149 701 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MTCO1P19-201ENST00000443487 500 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 PHBP16-201ENST00000446318 950 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 DHFRP3-201ENST00000455595 559 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 SNRPGP9-201ENST00000456025 225 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RNU6-956P-201ENST00000458868 103 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 snoU13.1-201ENST00000459157 104 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC026410.2-201ENST00000460281 156 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RPL7P22-201ENST00000466005 733 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RPL35AP15-201ENST00000468042 339 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 FAM172BP-201ENST00000487497 1089 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 VWA8P1-201ENST00000510889 176 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC104986.1-201ENST00000517978 436 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 OR5BC1P-201ENST00000529327 739 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 HSPE1P3-201ENST00000559254 309 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC012414.6-201ENST00000568241 401 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC012213.3-201ENST00000577199 777 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MIR4330-201ENST00000579077 105 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 MIR4715-201ENST00000584117 79 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 YWHAQP7-201ENST00000603536 658 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC090948.1-201ENST00000607464 549 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC239868.4-201ENST00000608318 671 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 AC009878.1-201ENST00000621819 340 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 NMD3P1-201ENST00000439704 1488 ntBASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP3Q96JB5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 AC007390.2-201ENST00000606229 3803 ntBASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP3Q96JB5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms