Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC090022.1-201ENST00000546569 311 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 BNIP3P16-201ENST00000589779 534 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RPS4XP21-201ENST00000603814 750 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL390877.1-201ENST00000605704 214 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC092608.2-201ENST00000624427 218 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC004656.1-201ENST00000568479 4951 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-701P-201ENST00000384059 107 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-505P-201ENST00000384427 107 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-178P-201ENST00000384631 104 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC026310.1-201ENST00000396004 378 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AL121835.1-201ENST00000404250 354 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 NDUFS5P1-201ENST00000405668 289 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC009310.1-201ENST00000414414 451 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 CYP4F30P-202ENST00000420048 405 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AL137014.1-201ENST00000420490 1226 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 BX284632.2-201ENST00000421091 399 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AL391219.1-201ENST00000422570 483 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC093151.1-201ENST00000427711 313 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 CBX3P6-201ENST00000430257 527 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RPL12P11-201ENST00000439970 501 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AL359955.2-201ENST00000445380 353 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC007383.1-201ENST00000445875 636 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RPS3AP41-201ENST00000462701 778 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 MTATP8P1-201ENST00000467115 207 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC104136.1-201ENST00000512969 394 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP228-201ENST00000516232 133 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-352P-201ENST00000516908 107 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 SNRPCP6-201ENST00000528310 210 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 GNAI2P1-201ENST00000541815 315 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 CYCSP38-201ENST00000559840 322 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 AC011373.1-201ENST00000607270 237 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 MRPL57P1-201ENST00000621486 265 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 MIR6503-201ENST00000622884 86 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 SMG1P5-202ENST00000529428 4219 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 SMG1P2-201ENST00000566127 4221 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.92□□□□□ -1.46
DEPDC4Q8N2C3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP478-201ENST00000364657 115 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 GNG5P2-201ENST00000372054 207 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.493-201ENST00000384422 102 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 MIR323B-201ENST00000385269 82 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 UBBP1-201ENST00000392399 473 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.594-201ENST00000410373 140 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-847P-201ENST00000411115 108 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC092447.6-201ENST00000414578 210 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC096644.2-201ENST00000429278 159 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RPS27AP12-201ENST00000429552 465 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms