Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE4Q8N205 MTCO1P6-201ENST00000481192 1384 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 MTND4P29-201ENST00000503122 1372 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE4Q8N205 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE4Q8N205 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 MIR491-201ENST00000384877 84 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 MIR195-201ENST00000385194 87 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 RN7SKP177-201ENST00000410567 355 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 RNU2-22P-201ENST00000411266 212 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AL161631.1-201ENST00000417933 486 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AP000936.3-201ENST00000438127 255 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC093155.1-201ENST00000440164 826 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 RPS4XP4-201ENST00000443195 763 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AL035551.1-201ENST00000446931 348 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 TRBV8-2-201ENST00000475637 270 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 ACTR3P3-201ENST00000480448 893 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC108471.1-201ENST00000513977 287 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 PAICSP4-201ENST00000517543 1253 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 ADI1P3-201ENST00000549509 470 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC009063.1-201ENST00000563342 702 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC120057.2-201ENST00000571520 271 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 EIF1P6-201ENST00000600054 334 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC055764.2-201ENST00000610089 670 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AL136981.2-201ENST00000617319 734 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC012314.7-201ENST00000619693 93 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC015908.5-201ENST00000623289 343 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 AC093648.1-201ENST00000623546 606 ntBASIC5.14□□□□□ -1.59
SYNE4Q8N205 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNE4Q8N205 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SYNE4Q8N205 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 MAPK10-320ENST00000641462 6696 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 RNU6-660P-201ENST00000364566 109 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 RNU6-213P-201ENST00000384051 104 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 Y_RNA.554-201ENST00000384672 102 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 RNU6-253P-201ENST00000384730 105 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 MIR525-201ENST00000384978 85 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 TAF9BP1-201ENST00000396646 746 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 MTCO3P31-201ENST00000405526 789 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 RPS3AP24-201ENST00000407896 734 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 RNU6-77P-201ENST00000410554 91 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 PIGPP2-201ENST00000411569 458 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC002524.1-201ENST00000411687 547 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 UBE2V1P8-201ENST00000437166 265 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 RPL23AP46-201ENST00000438548 490 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 NOTCH2P1-201ENST00000443481 624 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 HMGB1P16-201ENST00000447155 540 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC003071.1-201ENST00000451219 789 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AL133244.1-201ENST00000456007 258 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 SNORA59A-201ENST00000459326 152 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC073522.1-201ENST00000483312 377 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 RNU6-416P-201ENST00000516265 103 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 IGJP1-201ENST00000522682 475 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 GTF2IP22-201ENST00000554443 182 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC005255.1-201ENST00000593748 216 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms