Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 HSPE1P11-201ENST00000339579 310 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.105-201ENST00000363182 111 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 RNY3P11-201ENST00000364153 102 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 RNU6-153P-201ENST00000364422 104 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 DHFRP6-201ENST00000401776 268 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 RNU2-25P-201ENST00000411041 191 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.629-201ENST00000411368 105 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC096632.1-201ENST00000427395 310 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 HIGD1AP11-201ENST00000438361 280 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 OR13K1P-201ENST00000444577 975 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 NDUFB4P10-201ENST00000452541 359 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC015724.1-201ENST00000478577 156 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC098869.1-201ENST00000481627 292 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC034222.1-201ENST00000494052 532 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 IGLV3-30-201ENST00000524362 298 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AP000907.2-201ENST00000530827 353 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC090651.1-201ENST00000567865 634 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC110373.1-201ENST00000505994 3505 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 OR55B1P-203ENST00000641518 2602 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS3Q8IXF0 AC092692.1-201ENST00000623625 2595 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC009229.4-201ENST00000623854 1947 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC011933.1-201ENST00000413334 321 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 RPS4XP5-201ENST00000419038 768 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 RN7SL515P-201ENST00000463999 297 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 RPL31P50-201ENST00000471002 296 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 RPS17P15-201ENST00000475609 349 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC021146.3-201ENST00000511911 260 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 SNORA43.3-201ENST00000517240 103 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 IGLV2-28-201ENST00000520681 304 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 COX6CP8-201ENST00000522620 226 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 MIR3146-201ENST00000580367 79 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC025857.2-201ENST00000602711 238 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AL078605.1-201ENST00000603529 500 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AL139099.4-201ENST00000614802 114 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 CU639417.4-201ENST00000623928 207 ntBASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS3Q8IXF0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
NPAS3Q8IXF0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms