Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AKAP17BP-201ENST00000431706 2719 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AL122126.1-201ENST00000546905 1318 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RNU6-1140P-201ENST00000410517 106 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RN7SKP206-201ENST00000410823 293 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC099782.1-201ENST00000425889 474 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 PPIAP13-201ENST00000434706 478 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RPS26P56-201ENST00000444468 240 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AL031274.1-201ENST00000450334 232 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 OR2AQ1P-201ENST00000451972 200 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC105384.2-201ENST00000508433 640 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RNA5SP441-201ENST00000516809 88 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RNU6-64P-201ENST00000517119 105 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 CYCSP27-201ENST00000527643 293 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC036111.2-201ENST00000533247 901 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC027667.1-201ENST00000545814 304 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 MIR4301-201ENST00000577203 66 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC027229.1-201ENST00000583887 253 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC064801.1-201ENST00000612025 407 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 AC027287.1-201ENST00000553115 1453 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 RBPJP2-201ENST00000618187 1444 ntBASIC6.58□□□□□ -1.36
SCUBE3Q8IX30 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC009779.8-201ENST00000641684 4384 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 RNU1-49P-201ENST00000363468 159 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 Y_RNA.200-201ENST00000364018 102 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 MIR188-201ENST00000385034 86 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 RNA5SP36-201ENST00000410197 133 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 Y_RNA.793-201ENST00000411222 111 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 GAPDHP59-201ENST00000435908 267 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 PPIAP10-201ENST00000438675 458 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC005726.1-201ENST00000494679 427 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 RNU7-4P-201ENST00000516961 62 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 MIR3189-201ENST00000578735 73 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 VN1R91P-201ENST00000594377 169 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC008162.1-201ENST00000604718 254 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AL670379.4-201ENST00000605279 254 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AL352984.2-202ENST00000613699 155 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AP000547.3-204ENST00000588548 2523 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 DDX18P3-201ENST00000404856 2007 ntBASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SCUBE3Q8IX30 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms