Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AC098869.1-201ENST00000481627 292 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AC093267.1-201ENST00000489176 961 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AC093852.1-201ENST00000503587 266 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AC083829.1-201ENST00000503756 657 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 SNORA31.6-201ENST00000516241 130 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 SCARNA16.2-201ENST00000516520 172 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AL356432.3-201ENST00000568952 465 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 MIR4643-201ENST00000577473 78 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 MIR3613-201ENST00000579844 87 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 AL353997.4-201ENST00000586196 166 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 RN7SL787P-201ENST00000613000 284 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 MIR4272-201ENST00000635924 64 ntBASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAF7Q6Q0C0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC008957.3-201ENST00000624112 2242 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC090740.1-201ENST00000623193 2262 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNU6-151P-201ENST00000364158 107 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNU4-48P-201ENST00000365559 182 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNU6-47P-201ENST00000383866 107 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 MIR649-201ENST00000384843 97 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNU6-903P-201ENST00000391270 109 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RNU6-121P-201ENST00000410525 99 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC140059.1-201ENST00000489238 361 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC105384.2-201ENST00000508433 640 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SCARNA24.1-201ENST00000516465 137 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC027308.1-201ENST00000517993 110 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AP000907.2-201ENST00000530827 353 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 LARP7P2-201ENST00000575306 125 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 COX6CP7-201ENST00000597056 208 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AC072026.1-201ENST00000605023 201 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 U6.106-201ENST00000636360 105 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 AL161756.3-201ENST00000641216 2071 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 KPNA2P2-201ENST00000419546 1489 ntBASIC6.73□□□□□ -1.33
TRAF7Q6Q0C0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 BX322639.1-202ENST00000423987 2213 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 U8.7-201ENST00000364940 136 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 SNORA51.6-201ENST00000384151 125 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 Y_RNA.568-201ENST00000384742 113 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 AL356421.1-201ENST00000403255 413 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 AL096829.1-201ENST00000413677 457 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 RPS15AP12-201ENST00000419498 388 ntBASIC6.72□□□□□ -1.33
TRAF7Q6Q0C0 AL445305.1-201ENST00000432577 575 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms