Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC025181.1-201ENST00000477507 416 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AL158827.2-201ENST00000602494 330 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AL691447.3-201ENST00000635020 330 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC007342.7-201ENST00000624610 2337 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 U8.2-201ENST00000363156 134 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 RPL23AP14-201ENST00000468281 468 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AP001004.1-201ENST00000582468 324 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 SRIP1-201ENST00000489235 288 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC092045.1-201ENST00000495716 1231 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AF186190.1-201ENST00000517470 480 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 OR8L1P-201ENST00000534005 955 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC007423.1-201ENST00000605009 627 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 CTSLP2-204ENST00000629029 392 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC092079.1-201ENST00000558620 1985 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 HIGD1AP2-201ENST00000446367 280 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC234781.5-201ENST00000508429 271 ntBASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13DQ5THJ4 RNU1-35P-201ENST00000362782 153 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 FGF7P3-201ENST00000454645 303 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC133134.1-201ENST00000466800 359 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 CYCSP20-201ENST00000473154 315 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC007938.3-201ENST00000604965 623 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AL592295.2-201ENST00000612578 206 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 DCAF13P3-201ENST00000561147 1334 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RNU6-76P-201ENST00000384060 104 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RN7SKP285-201ENST00000410137 318 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RPLP0P7-201ENST00000416050 667 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC073136.2-201ENST00000417282 849 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 Z99127.2-201ENST00000441426 334 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC092436.1-201ENST00000506450 503 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 OR4H12P-201ENST00000556269 907 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC008277.2-201ENST00000605196 797 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AP004217.1-201ENST00000480579 346 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RFPL1S-203ENST00000539579 330 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 SNORA35B-201ENST00000607417 129 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC090115.4-201ENST00000609970 188 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC138915.3-201ENST00000562908 1389 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AL513043.1-201ENST00000439124 535 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 RN7SKP210-201ENST00000459176 261 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC021146.5-201ENST00000503544 545 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AP000857.1-201ENST00000532151 543 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AL109741.3-201ENST00000561748 592 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 DEFB122-202ENST00000569013 197 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 AP000919.1-202ENST00000581139 1264 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 NTAN1P1-201ENST00000603150 646 ntBASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VPS13DQ5THJ4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 OR4G1P-202ENST00000641173 1788 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms