Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 BOLA3P4-201ENST00000418151 400 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AL139095.3-201ENST00000419672 1203 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC048351.1-201ENST00000420064 602 ntBASIC4.02□□□□□ -1.77
LTBQ06643 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LTBQ06643 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LTBQ06643 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 RPL23AP25-201ENST00000430973 463 ntBASIC4.02□□□□□ -1.77
LTBQ06643 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.02□□□□□ -1.77
LTBQ06643 AL450263.2-201ENST00000439400 589 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LTBQ06643 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 PHBP16-201ENST00000446318 950 ntBASIC4.02□□□□□ -1.77
LTBQ06643 SSXP1-201ENST00000453640 473 ntBASIC4.02□□□□□ -1.77
LTBQ06643 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
LTBQ06643 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.02□□□□□ -1.77
LTBQ06643 BNIP3P41-201ENST00000503774 571 ntBASIC4.02□□□□□ -1.77
LTBQ06643 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LTBQ06643 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.02□□□□□ -1.77
LTBQ06643 AC022882.1-201ENST00000532142 501 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC136619.2-201ENST00000563361 631 ntBASIC4.02□□□□□ -1.77
LTBQ06643 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.02□□□□□ -1.77
LTBQ06643 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.02□□□□□ -1.77
LTBQ06643 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.02□□□□□ -1.77
LTBQ06643 MIR548AB-201ENST00000584917 84 ntBASIC4.02□□□□□ -1.77
LTBQ06643 BNIP3P30-201ENST00000601184 574 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC012065.4-201ENST00000602445 679 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC010200.2-201ENST00000605098 235 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC109347.2-201ENST00000610220 349 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC026368.1-201ENST00000614934 690 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC009237.17-201ENST00000618111 748 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC018926.3-201ENST00000618841 406 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AL445567.2-201ENST00000618935 498 ntBASIC4.02□□□□□ -1.77
LTBQ06643 MIR6075-201ENST00000620782 95 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LTBQ06643 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 AC006065.6-201ENST00000625201 545 ntBASIC4.02□□□□□ -1.77
LTBQ06643 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.02□□□□□ -1.77
LTBQ06643 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.02□□□□□ -1.77
LTBQ06643 MKKS-204ENST00000639674 192 ntBASIC4.02□□□□□ -1.77
LTBQ06643 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LTBQ06643 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBQ06643 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LTBQ06643 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
LTBQ06643 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LTBQ06643 CR383658.2-201ENST00000547576 1525 ntBASIC4.01□□□□□ -1.77
LTBQ06643 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.01□□□□□ -1.77
LTBQ06643 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
LTBQ06643 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LTBQ06643 RPL21P132-201ENST00000331267 462 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RNA5SP307-201ENST00000362863 116 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RNU4-44P-201ENST00000363050 141 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RNU6-433P-201ENST00000363216 104 ntBASIC4.01□□□□□ -1.77
LTBQ06643 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
LTBQ06643 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LTBQ06643 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LTBQ06643 AL078604.1-201ENST00000404609 466 ntBASIC4.01□□□□□ -1.77
LTBQ06643 MIR1284-201ENST00000408337 120 ntBASIC4.01□□□□□ -1.77
LTBQ06643 MIR548F1-201ENST00000408667 84 ntBASIC4.01□□□□□ -1.77
LTBQ06643 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.01□□□□□ -1.77
LTBQ06643 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LTBQ06643 RPS7P13-201ENST00000413955 498 ntBASIC4.01□□□□□ -1.77
LTBQ06643 SNRPFP1-201ENST00000414761 252 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RPL7AP25-201ENST00000423357 805 ntBASIC4.01□□□□□ -1.77
LTBQ06643 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LTBQ06643 DYNLL1P7-201ENST00000429273 258 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AL353597.2-202ENST00000434901 373 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 RBMX2P4-201ENST00000441256 376 ntBASIC4.01□□□□□ -1.77
LTBQ06643 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.01□□□□□ -1.77
LTBQ06643 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RPL7L1P1-201ENST00000448259 785 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.01□□□□□ -1.77
LTBQ06643 snoU13.24-201ENST00000458998 104 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RPS27AP17-201ENST00000463344 455 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC010307.1-201ENST00000467206 836 ntBASIC4.01□□□□□ -1.77
LTBQ06643 RPL7P19-201ENST00000469948 618 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 PPBPP1-201ENST00000510807 373 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC015795.1-201ENST00000513669 327 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC008694.2-201ENST00000517591 306 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC008802.1-201ENST00000519121 791 ntBASIC4.01□□□□□ -1.77
LTBQ06643 IGLV3-26-201ENST00000520756 302 ntBASIC4.01□□□□□ -1.77
LTBQ06643 MRPL49P2-201ENST00000521066 465 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AP001189.2-201ENST00000527320 189 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AP000827.1-201ENST00000527814 258 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.01□□□□□ -1.77
LTBQ06643 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.01□□□□□ -1.77
LTBQ06643 AC068831.4-201ENST00000556118 109 ntBASIC4.01□□□□□ -1.77
LTBQ06643 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.01□□□□□ -1.77
LTBQ06643 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.01□□□□□ -1.77
LTBQ06643 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.01□□□□□ -1.77
LTBQ06643 AC090751.1-201ENST00000566966 267 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms