Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 KRT19P6-201ENST00000510983 209 ntBASIC3.38□□□□□ -1.87
LMO4P61968 HMGB3P13-201ENST00000511263 607 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AC010587.2-201ENST00000511727 448 ntBASIC3.38□□□□□ -1.87
LMO4P61968 HNRNPKP5-201ENST00000515300 253 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
LMO4P61968 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO4P61968 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.38□□□□□ -1.87
LMO4P61968 AF279873.1-201ENST00000523393 313 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMO4P61968 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMO4P61968 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO4P61968 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.38□□□□□ -1.87
LMO4P61968 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
LMO4P61968 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO4P61968 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO4P61968 BNIP3P26-201ENST00000600827 554 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AC018714.1-201ENST00000605028 208 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AC245389.1-201ENST00000605141 529 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AP005137.2-201ENST00000609238 400 ntBASIC3.38□□□□□ -1.87
LMO4P61968 MIR6868-201ENST00000611215 58 ntBASIC3.38□□□□□ -1.87
LMO4P61968 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LMO4P61968 AC073534.2-201ENST00000620377 381 ntBASIC3.38□□□□□ -1.87
LMO4P61968 RNU6-156P-201ENST00000621869 107 ntBASIC3.38□□□□□ -1.87
LMO4P61968 AL160394.1-201ENST00000624765 724 ntBASIC3.38□□□□□ -1.87
LMO4P61968 MIR6715B-201ENST00000637172 77 ntBASIC3.38□□□□□ -1.87
LMO4P61968 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 FAM91A3P-201ENST00000456826 2544 ntBASIC3.38□□□□□ -1.87
LMO4P61968 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO4P61968 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
LMO4P61968 AC016588.2-201ENST00000632484 3021 ntBASIC3.38□□□□□ -1.87
LMO4P61968 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMO4P61968 AC105074.1-201ENST00000623380 3095 ntBASIC3.38□□□□□ -1.87
LMO4P61968 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO4P61968 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO4P61968 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC016716.1-201ENST00000265882 708 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC067945.1-201ENST00000342609 618 ntBASIC3.37□□□□□ -1.87
LMO4P61968 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RNU6-984P-201ENST00000363236 109 ntBASIC3.37□□□□□ -1.87
LMO4P61968 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO4P61968 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LMO4P61968 Y_RNA.517-201ENST00000384551 106 ntBASIC3.37□□□□□ -1.87
LMO4P61968 TAF9BP1-201ENST00000396646 746 ntBASIC3.37□□□□□ -1.87
LMO4P61968 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RNA5SP80-201ENST00000410475 111 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RN7SKP142-201ENST00000411236 328 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RNU6-575P-201ENST00000411326 105 ntBASIC3.37□□□□□ -1.87
LMO4P61968 PGBD4P8-201ENST00000412993 562 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO4P61968 AC007435.1-201ENST00000421086 415 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC004448.2-201ENST00000422360 586 ntBASIC3.37□□□□□ -1.87
LMO4P61968 SKP1P3-201ENST00000429280 487 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 USP9YP31-201ENST00000431405 881 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO4P61968 TBCAP1-201ENST00000436520 327 ntBASIC3.37□□□□□ -1.87
LMO4P61968 MTND2P20-201ENST00000440805 661 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 RNU6-956P-201ENST00000458868 103 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RPL5P30-201ENST00000465511 891 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RPS20P21-201ENST00000466859 343 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC011825.1-201ENST00000484967 388 ntBASIC3.37□□□□□ -1.87
LMO4P61968 NCOR1P1-202ENST00000486162 291 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RPS4XP15-201ENST00000489210 795 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AC146944.2-203ENST00000502493 354 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC147055.4-201ENST00000504399 745 ntBASIC3.37□□□□□ -1.87
LMO4P61968 WBP1LP4-201ENST00000505043 344 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC090071.1-201ENST00000507713 644 ntBASIC3.37□□□□□ -1.87
LMO4P61968 CBX3P3-201ENST00000508108 532 ntBASIC3.37□□□□□ -1.87
LMO4P61968 LTV1P1-201ENST00000510683 1237 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC079140.3-201ENST00000511111 550 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC139495.1-202ENST00000513164 354 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 SNORA67.7-201ENST00000516664 135 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RNU1-45P-201ENST00000517191 141 ntBASIC3.37□□□□□ -1.87
LMO4P61968 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 AC008694.2-201ENST00000517591 306 ntBASIC3.37□□□□□ -1.87
LMO4P61968 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 MTCYBP41-201ENST00000528913 1123 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC100770.1-201ENST00000532310 322 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms