Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC025588.3-201ENST00000604182 274 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 SUMO2P15-201ENST00000604285 278 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 AC093788.1-201ENST00000609356 927 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 MIR6826-201ENST00000617808 98 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 AC079597.1-201ENST00000624306 508 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 AC006065.6-201ENST00000625201 545 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.49□□□□□ -1.69
CLRN1P58418 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLRN1P58418 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.49□□□□□ -1.69
CLRN1P58418 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 AC107068.1-201ENST00000563286 4218 ntBASIC4.49□□□□□ -1.69
CLRN1P58418 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
CLRN1P58418 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLRN1P58418 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 ZNF652P1-201ENST00000442420 1309 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 RNU1-130P-201ENST00000363930 160 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 SNORA70.10-201ENST00000384515 134 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 RPL21P111-201ENST00000418453 477 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 DDX39BP1-205ENST00000422507 192 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC007283.2-201ENST00000424739 197 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 OR4F13P-201ENST00000428478 931 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC119618.1-201ENST00000434191 222 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AL356276.2-201ENST00000435919 558 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 RPL35AP21-201ENST00000437667 333 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 RPL7P54-201ENST00000438336 674 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC114755.5-201ENST00000447760 831 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 TPT1P14-201ENST00000448018 505 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC092001.1-201ENST00000453012 261 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC097484.1-201ENST00000471148 389 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC022034.3-201ENST00000471393 478 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AP000852.1-201ENST00000472460 573 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC010683.1-201ENST00000473673 378 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC104383.1-201ENST00000530297 370 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC009117.1-201ENST00000563948 554 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC090615.1-201ENST00000577519 154 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 MIR4489-201ENST00000578869 62 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 MIR1269B-201ENST00000580405 75 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 MIR3176-201ENST00000582210 90 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC007621.1-201ENST00000604544 437 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AL353621.2-201ENST00000605340 133 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 AL136295.6-201ENST00000610486 658 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 AL596245.1-201ENST00000618994 362 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC012150.2-201ENST00000621300 544 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC138965.3-201ENST00000623875 498 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 AC027228.2-201ENST00000567141 2154 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.48□□□□□ -1.69
CLRN1P58418 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.48□□□□□ -1.69
CLRN1P58418 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.48□□□□□ -1.69
CLRN1P58418 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLRN1P58418 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLRN1P58418 RNA5SP258-201ENST00000362750 119 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RNU6-97P-201ENST00000363387 104 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms