Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 AC074050.1-201ENST00000563247 211 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 MIR5186-201ENST00000577504 120 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN2P57739 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN2P57739 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN2P57739 AC080013.4-201ENST00000607624 649 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 AL513477.2-201ENST00000607858 568 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 AC009090.3-201ENST00000616553 565 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CLDN2P57739 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 AL513185.3-201ENST00000433335 1300 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN2P57739 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN2P57739 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN2P57739 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLDN2P57739 AP001273.1-201ENST00000624493 3152 ntBASIC4.1□□□□□ -1.75
CLDN2P57739 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN2P57739 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN2P57739 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN2P57739 Y_RNA.302-201ENST00000364997 102 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AL359837.1-201ENST00000381357 287 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN2P57739 RNA5SP372-201ENST00000390836 115 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 AC093698.1-201ENST00000423843 571 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 ELOCP8-201ENST00000439309 332 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 ELOCP15-201ENST00000442090 332 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN2P57739 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 AC092045.1-201ENST00000495716 1231 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 RN7SKP234-201ENST00000517173 224 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AC104986.1-201ENST00000517978 436 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AC008802.1-201ENST00000519121 791 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CLDN2P57739 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN2P57739 PHBP17-201ENST00000528576 541 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN2P57739 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN2P57739 AL133457.1-201ENST00000564251 987 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN2P57739 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 AL606490.9-201ENST00000603331 271 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AL590229.1-201ENST00000603497 542 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 RPL23AP92-201ENST00000603609 255 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 AC008785.1-201ENST00000624475 456 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 CYP3A51P-201ENST00000633513 256 ntBASIC4.09□□□□□ -1.75
CLDN2P57739 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CLDN2P57739 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN2P57739 NEAT1-202ENST00000501122 22743 ntBASIC4.09□□□□□ -1.76
CLDN2P57739 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN2P57739 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN2P57739 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN2P57739 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN2P57739 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 RNA5SP88-201ENST00000365560 109 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 Y_RNA.560-201ENST00000384689 102 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 AC016769.3-201ENST00000396562 315 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 RN7SKP202-201ENST00000410439 330 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN2P57739 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 AC083875.1-201ENST00000419509 405 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN2P57739 RBMY1KP-201ENST00000423480 476 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 OR5BE1P-201ENST00000425977 939 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN2P57739 ZYG11AP1-201ENST00000430329 837 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 MTND1P20-201ENST00000430341 950 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN2P57739 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN2P57739 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN2P57739 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN2P57739 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN2P57739 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN2P57739 RPS4XP4-201ENST00000443195 763 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN2P57739 ELL2P3-201ENST00000457883 1602 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 RPL38P1-201ENST00000460914 211 ntBASIC4.08□□□□□ -1.76
CLDN2P57739 RPL37P6-202ENST00000464216 403 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms