Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BNIP3P41-201ENST00000503774 571 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.4□□□□□ -1.71
SUMO3P55854 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 RNA5SP392-201ENST00000516905 112 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 AP003122.4-201ENST00000530980 758 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.4□□□□□ -1.71
SUMO3P55854 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 AL049839.1-201ENST00000556151 657 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 AC009063.1-201ENST00000563342 702 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.4□□□□□ -1.71
SUMO3P55854 OR1F2P-201ENST00000570470 933 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.4□□□□□ -1.71
SUMO3P55854 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 CKS1BP3-201ENST00000600888 237 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AL021997.1-201ENST00000605757 193 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC011816.2-201ENST00000607089 556 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC007497.1-201ENST00000610421 561 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC091834.1-201ENST00000614543 472 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SUMO3P55854 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.4□□□□□ -1.71
SUMO3P55854 AC010149.2-201ENST00000637608 315 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC131971.1-201ENST00000332881 1482 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 AC090337.1-201ENST00000579651 2074 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SUMO3P55854 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 MAPK10-349ENST00000641767 3661 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 SDAD1P1-202ENST00000524156 2051 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 AC074029.4-201ENST00000624796 1859 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 SNORA74A-201ENST00000364089 198 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 RNU6-259P-201ENST00000383999 107 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 RNU6-1215P-201ENST00000384441 102 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 MIR124-3-201ENST00000384866 87 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SUMO3P55854 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.39□□□□□ -1.71
SUMO3P55854 SPA17P1-201ENST00000416656 452 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 RPL23AP41-201ENST00000484754 458 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 NDUFB5P1-201ENST00000508134 564 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 BTF3P13-201ENST00000513224 490 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 SNORA18.6-201ENST00000516792 115 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.39□□□□□ -1.71
SUMO3P55854 AC022616.6-201ENST00000520479 119 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 AP001922.4-201ENST00000526967 290 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 BRD9P1-201ENST00000529855 560 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.39□□□□□ -1.71
SUMO3P55854 AC060771.1-201ENST00000582031 164 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 HMGN1P30-201ENST00000589286 268 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 AC011451.2-201ENST00000604303 598 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 AL356585.4-201ENST00000623078 1229 ntBASIC4.39□□□□□ -1.71
SUMO3P55854 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SUMO3P55854 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.39□□□□□ -1.71
SUMO3P55854 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
SUMO3P55854 TLK1P1-201ENST00000456760 2440 ntBASIC4.38□□□□□ -1.71
SUMO3P55854 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SUMO3P55854 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.38□□□□□ -1.71
SUMO3P55854 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.38□□□□□ -1.71
SUMO3P55854 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SUMO3P55854 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SUMO3P55854 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.38□□□□□ -1.71
SUMO3P55854 AL356489.2-201ENST00000566968 3528 ntBASIC4.38□□□□□ -1.71
SUMO3P55854 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SUMO3P55854 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
SUMO3P55854 Y_RNA.41-201ENST00000362646 102 ntBASIC4.38□□□□□ -1.71
SUMO3P55854 SNORA51.8-201ENST00000384234 132 ntBASIC4.38□□□□□ -1.71
SUMO3P55854 Y_RNA.548-201ENST00000384656 105 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms