Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC118942.1-201ENST00000529674 1035 ntBASIC3.31□□□□□ -1.88
LIM2P55344 DEFB130C-202ENST00000530001 230 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AL139174.1-201ENST00000531489 886 ntBASIC3.31□□□□□ -1.88
LIM2P55344 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 BNIP3P38-201ENST00000601117 544 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 SNORA51-201ENST00000606420 132 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC068722.2-201ENST00000618734 544 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AL512506.2-201ENST00000624472 458 ntBASIC3.31□□□□□ -1.88
LIM2P55344 TNPO1P3-201ENST00000436471 2662 ntBASIC3.31□□□□□ -1.88
LIM2P55344 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.3□□□□□ -1.88
LIM2P55344 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LIM2P55344 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
LIM2P55344 RNU5E-10P-201ENST00000363506 118 ntBASIC3.3□□□□□ -1.88
LIM2P55344 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 RNU6-441P-201ENST00000384545 106 ntBASIC3.3□□□□□ -1.88
LIM2P55344 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
LIM2P55344 ATP5F1P3-201ENST00000397213 657 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 AL603865.2-201ENST00000401679 213 ntBASIC3.3□□□□□ -1.88
LIM2P55344 GSTA8P-201ENST00000404253 637 ntBASIC3.3□□□□□ -1.88
LIM2P55344 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 RPL36P19-201ENST00000430744 301 ntBASIC3.3□□□□□ -1.88
LIM2P55344 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL034418.1-201ENST00000448675 860 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 AP000926.1-201ENST00000479573 241 ntBASIC3.3□□□□□ -1.88
LIM2P55344 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIM2P55344 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.3□□□□□ -1.88
LIM2P55344 KLRA1P-201ENST00000503499 986 ntBASIC3.3□□□□□ -1.88
LIM2P55344 BOLA3P3-201ENST00000505182 232 ntBASIC3.3□□□□□ -1.88
LIM2P55344 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.3□□□□□ -1.88
LIM2P55344 PTGES3P3-201ENST00000511479 482 ntBASIC3.3□□□□□ -1.88
LIM2P55344 MTCO3P15-201ENST00000526563 574 ntBASIC3.3□□□□□ -1.88
LIM2P55344 OR5B10P-201ENST00000532869 642 ntBASIC3.3□□□□□ -1.88
LIM2P55344 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIM2P55344 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.3□□□□□ -1.88
LIM2P55344 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
LIM2P55344 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LIM2P55344 YWHAZP1-201ENST00000556286 722 ntBASIC3.3□□□□□ -1.88
LIM2P55344 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIM2P55344 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LIM2P55344 MIR3922-201ENST00000585192 84 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AC090330.1-201ENST00000588646 764 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 AL606834.3-201ENST00000602615 496 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AP000238.1-201ENST00000608759 426 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AP005137.2-201ENST00000609238 400 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL592148.2-201ENST00000612210 372 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AC022306.3-201ENST00000619930 550 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AL157770.1-201ENST00000623049 439 ntBASIC3.3□□□□□ -1.88
LIM2P55344 AC006065.5-201ENST00000623427 349 ntBASIC3.3□□□□□ -1.88
LIM2P55344 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 AC087821.2-201ENST00000637086 450 ntBASIC3.3□□□□□ -1.88
LIM2P55344 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LIM2P55344 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
LIM2P55344 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 RNU6-921P-201ENST00000384361 107 ntBASIC3.29□□□□□ -1.88
LIM2P55344 MCTS2P-201ENST00000394552 546 ntBASIC3.29□□□□□ -1.88
LIM2P55344 RN7SKP285-201ENST00000410137 318 ntBASIC3.29□□□□□ -1.88
LIM2P55344 MTND4P3-201ENST00000417829 541 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
LIM2P55344 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 RPL23AP33-201ENST00000442301 452 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 AL590399.6-201ENST00000446396 307 ntBASIC3.29□□□□□ -1.88
LIM2P55344 MRPL42P4-201ENST00000453267 443 ntBASIC3.29□□□□□ -1.88
LIM2P55344 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 AC104982.1-201ENST00000478775 574 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AP002812.1-201ENST00000495378 474 ntBASIC3.29□□□□□ -1.88
LIM2P55344 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 SUMO2P5-201ENST00000506790 245 ntBASIC3.29□□□□□ -1.88
LIM2P55344 Vault.1-201ENST00000516474 102 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms