Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.43□□□□□ -1.86
CDH6P55285 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH6P55285 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH6P55285 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CDH6P55285 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH6P55285 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH6P55285 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH6P55285 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH6P55285 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH6P55285 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH6P55285 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDH6P55285 RNA5SP295-201ENST00000362655 121 ntBASIC3.42□□□□□ -1.86
CDH6P55285 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
CDH6P55285 SNORA51.2-201ENST00000364595 132 ntBASIC3.42□□□□□ -1.86
CDH6P55285 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
CDH6P55285 SKINT1L-201ENST00000401057 817 ntBASIC3.42□□□□□ -1.86
CDH6P55285 RN7SKP27-201ENST00000410684 333 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC073264.1-201ENST00000411508 416 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 RPL31P12-201ENST00000422587 358 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH6P55285 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 AC005019.1-201ENST00000436455 431 ntBASIC3.42□□□□□ -1.86
CDH6P55285 ATP5C1P1-201ENST00000441945 895 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AL662791.1-201ENST00000441992 928 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 MTND1P33-201ENST00000446251 917 ntBASIC3.42□□□□□ -1.86
CDH6P55285 CYCSP35-201ENST00000451978 304 ntBASIC3.42□□□□□ -1.86
CDH6P55285 PTGES3P5-201ENST00000455109 434 ntBASIC3.42□□□□□ -1.86
CDH6P55285 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC087879.1-201ENST00000474343 374 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC108729.2-201ENST00000476543 840 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 AC026616.1-201ENST00000523157 525 ntBASIC3.42□□□□□ -1.86
CDH6P55285 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH6P55285 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH6P55285 AC010198.2-201ENST00000550612 259 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH6P55285 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH6P55285 IGHV3-29-201ENST00000604817 344 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC079791.1-201ENST00000605356 973 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC012467.1-201ENST00000607740 256 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AL450489.1-201ENST00000612071 468 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC005156.1-201ENST00000613371 573 ntBASIC3.42□□□□□ -1.86
CDH6P55285 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH6P55285 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH6P55285 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH6P55285 ZNF37BP-203ENST00000452306 1352 ntBASIC3.41□□□□□ -1.86
CDH6P55285 OR6K3-202ENST00000368146 996 ntBASIC3.41□□□□□ -1.86
CDH6P55285 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 RNU6-1005P-201ENST00000384519 107 ntBASIC3.41□□□□□ -1.86
CDH6P55285 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH6P55285 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 RPL36P19-201ENST00000430744 301 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AL159987.2-201ENST00000432754 307 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 ISCA1P2-201ENST00000438679 421 ntBASIC3.41□□□□□ -1.86
CDH6P55285 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 Z99127.3-201ENST00000448158 395 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 RPS4XP13-201ENST00000483219 789 ntBASIC3.41□□□□□ -1.86
CDH6P55285 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.41□□□□□ -1.86
CDH6P55285 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC108078.3-201ENST00000502633 489 ntBASIC3.41□□□□□ -1.86
CDH6P55285 RNF138P1-201ENST00000502765 546 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 MTCYBP41-201ENST00000528913 1123 ntBASIC3.41□□□□□ -1.86
CDH6P55285 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 AC010735.1-201ENST00000567305 1026 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 MIR4429-201ENST00000580105 73 ntBASIC3.41□□□□□ -1.86
CDH6P55285 MIR4444-1-201ENST00000581696 74 ntBASIC3.41□□□□□ -1.86
CDH6P55285 MIR4444-2-201ENST00000584390 74 ntBASIC3.41□□□□□ -1.86
CDH6P55285 OR4G1P-201ENST00000588632 938 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH6P55285 OR4H6P-202ENST00000603819 340 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
CDH6P55285 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
CDH6P55285 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 AL356118.1-201ENST00000635272 1078 ntBASIC3.41□□□□□ -1.86
CDH6P55285 OR8B1P-202ENST00000641132 1178 ntBASIC3.41□□□□□ -1.86
CDH6P55285 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH6P55285 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH6P55285 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH6P55285 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH6P55285 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH6P55285 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH6P55285 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms