Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR2682-201ENST00000580305 110 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 MIR4513-201ENST00000581077 86 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS2P54868 AC008507.2-201ENST00000588402 1176 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC090330.1-201ENST00000588646 764 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC067852.4-201ENST00000590314 478 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.77□□□□□ -1.81
HMGCS2P54868 AC011492.1-201ENST00000600023 315 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC097504.2-201ENST00000608088 454 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC105227.2-201ENST00000615075 605 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 FRG1HP-204ENST00000617940 757 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC004808.1-201ENST00000627671 721 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HMGCS2P54868 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS2P54868 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGCS2P54868 MTND4P31-201ENST00000425607 1343 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 DCAF13P3-201ENST00000561147 1334 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 OR5H2-201ENST00000355273 945 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HMGCS2P54868 RNU6-98P-201ENST00000384173 107 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AP002784.2-201ENST00000397300 549 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RPL23AP48-201ENST00000406913 488 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AL603766.1-201ENST00000407763 664 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RNA5SP239-201ENST00000410218 129 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGCS2P54868 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AC073310.1-201ENST00000423226 1033 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RPL35AP12-201ENST00000425362 338 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 DEFB130D-201ENST00000426866 237 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 BX890604.2-201ENST00000427883 474 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RPS7P2-201ENST00000435134 607 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 ELOCP11-201ENST00000436690 332 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 ELOCP16-201ENST00000444494 332 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 ARL5AP2-201ENST00000444698 533 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGCS2P54868 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 MTCO3P20-201ENST00000454926 688 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RPL23AP67-201ENST00000465341 474 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 RPL30P11-201ENST00000495304 339 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 AC069306.1-201ENST00000507006 843 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC008885.1-201ENST00000514930 301 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 HIGD1AP3-201ENST00000515857 278 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AP002812.4-201ENST00000532139 286 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AP003717.3-201ENST00000544832 1180 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGCS2P54868 UBL5P2-201ENST00000583788 219 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AC006504.3-201ENST00000586818 523 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 PCNAP1-202ENST00000595299 752 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC083899.3-201ENST00000603413 594 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AL158050.2-201ENST00000605336 568 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC112503.1-201ENST00000608436 391 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 RMST_9.1-201ENST00000619945 193 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC126544.2-201ENST00000625174 749 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGCS2P54868 AL137790.1-201ENST00000634283 177 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 AC099654.8-201ENST00000637757 681 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 MTCO1P18-201ENST00000455518 1419 ntBASIC3.76□□□□□ -1.81
HMGCS2P54868 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGCS2P54868 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGCS2P54868 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS2P54868 AC138393.1-206ENST00000540997 1886 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 RNU6-925P-201ENST00000384629 104 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AL355615.1-201ENST00000406187 641 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 UBE2V1P11-201ENST00000411559 285 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS2P54868 VTA1P1-201ENST00000414044 866 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGCS2P54868 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGCS2P54868 AC008065.1-201ENST00000428525 348 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC140076.1-201ENST00000449897 361 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AL096803.2-201ENST00000450032 677 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 RPS17P11-201ENST00000474297 293 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGCS2P54868 AC104687.1-201ENST00000485829 412 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGCS2P54868 OR5H4P-201ENST00000510851 923 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC107934.2-201ENST00000518653 310 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AL121576.1-201ENST00000556055 276 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS2P54868 ZNF92P3-201ENST00000596594 954 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC105148.1-201ENST00000604961 409 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC093732.2-201ENST00000607950 274 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 uc_338.1-201ENST00000612113 180 ntBASIC3.75□□□□□ -1.81
HMGCS2P54868 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGCS2P54868 AC132825.7-201ENST00000638744 335 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms