Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SNORD39.4-201ENST00000620099 78 ntBASIC2.7□□□□□ -1.98
NKX2-5P52952 RNA5SP196-201ENST00000625967 102 ntBASIC2.7□□□□□ -1.98
NKX2-5P52952 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-5P52952 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NKX2-5P52952 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-5P52952 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-5P52952 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-5P52952 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-5P52952 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-5P52952 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 SNORA58B-201ENST00000364259 136 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 RNA5SP130-201ENST00000364431 114 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC068538.1-201ENST00000376856 336 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 SNORA51.12-201ENST00000384448 134 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 RNA5SP38-201ENST00000410750 119 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 VTA1P1-201ENST00000414044 866 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 RPS7P15-201ENST00000415804 584 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AL451074.5-201ENST00000415894 435 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 SSXP9-201ENST00000417503 292 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC012065.2-201ENST00000421295 375 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 COX6CP15-201ENST00000426313 211 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC023141.6-201ENST00000429418 337 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 RPL36P19-201ENST00000430744 301 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 RPS29P6-201ENST00000438196 145 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AL513321.1-201ENST00000441175 761 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC092685.1-201ENST00000447960 1243 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-5P52952 RPS29P12-201ENST00000460178 152 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-5P52952 SNORA70.18-201ENST00000516696 98 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-5P52952 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-5P52952 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 AC051619.2-201ENST00000559063 397 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 DPRXP5-201ENST00000604662 539 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 AC106791.2-201ENST00000604680 391 ntBASIC2.69□□□□□ -1.98
NKX2-5P52952 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-5P52952 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-5P52952 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-5P52952 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-5P52952 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
NKX2-5P52952 AC091564.4-201ENST00000533934 2194 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 MFSD8-233ENST00000641482 4860 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NKX2-5P52952 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
NKX2-5P52952 SSXP10-201ENST00000402595 565 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 RPS4XP9-201ENST00000405151 780 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 RNA5SP229-201ENST00000410809 99 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AL606495.1-201ENST00000422100 813 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC233982.1-201ENST00000451247 436 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 MRPL35P4-201ENST00000453682 566 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC026979.1-201ENST00000492525 396 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 RPL7P23-201ENST00000493874 747 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 DYNLL1P6-201ENST00000503440 264 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
NKX2-5P52952 FCF1P8-201ENST00000510322 597 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-5P52952 SNORA31.13-201ENST00000516624 135 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-5P52952 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 AP003730.1-201ENST00000524605 285 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC005476.1-201ENST00000554427 397 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-5P52952 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 AC015917.1-201ENST00000579654 510 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC091057.2-201ENST00000602594 792 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 RNU4-89P-201ENST00000607443 133 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 AC097372.4-201ENST00000625025 466 ntBASIC2.68□□□□□ -1.98
NKX2-5P52952 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-5P52952 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms