Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC021146.8-201ENST00000507455 733 ntBASIC3.51□□□□□ -1.85
CDX1P47902 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDX1P47902 AC093853.1-201ENST00000515689 483 ntBASIC3.51□□□□□ -1.85
CDX1P47902 RNU6-150P-201ENST00000516237 95 ntBASIC3.51□□□□□ -1.85
CDX1P47902 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.51□□□□□ -1.85
CDX1P47902 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDX1P47902 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.51□□□□□ -1.85
CDX1P47902 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.51□□□□□ -1.85
CDX1P47902 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.51□□□□□ -1.85
CDX1P47902 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDX1P47902 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.51□□□□□ -1.85
CDX1P47902 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 BPIFA4P-203ENST00000603168 689 ntBASIC3.51□□□□□ -1.85
CDX1P47902 AC010738.1-201ENST00000604970 987 ntBASIC3.51□□□□□ -1.85
CDX1P47902 AL592221.1-201ENST00000605266 382 ntBASIC3.51□□□□□ -1.85
CDX1P47902 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
CDX1P47902 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 AL391261.4-201ENST00000616012 481 ntBASIC3.51□□□□□ -1.85
CDX1P47902 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.51□□□□□ -1.85
CDX1P47902 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.51□□□□□ -1.85
CDX1P47902 AC006065.6-201ENST00000625201 545 ntBASIC3.51□□□□□ -1.85
CDX1P47902 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.51□□□□□ -1.85
CDX1P47902 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.51□□□□□ -1.85
CDX1P47902 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDX1P47902 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDX1P47902 LINC00622-201ENST00000562811 1570 ntBASIC3.51□□□□□ -1.85
CDX1P47902 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CDX1P47902 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
CDX1P47902 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.5□□□□□ -1.85
CDX1P47902 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 AC007685.1-201ENST00000329806 452 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RNU6-157P-201ENST00000383957 107 ntBASIC3.5□□□□□ -1.85
CDX1P47902 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDX1P47902 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.5□□□□□ -1.85
CDX1P47902 MTCO2P5-201ENST00000422621 426 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RPL7AP25-201ENST00000423357 805 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 MUPP-201ENST00000438111 566 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 TPT1P12-201ENST00000448968 492 ntBASIC3.5□□□□□ -1.85
CDX1P47902 MTND2P19-201ENST00000449129 1012 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC012671.1-201ENST00000451912 203 ntBASIC3.5□□□□□ -1.85
CDX1P47902 ANKRD26P4-201ENST00000455755 950 ntBASIC3.5□□□□□ -1.85
CDX1P47902 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RPS23P7-201ENST00000466210 444 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC092451.1-201ENST00000480211 153 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RPL31P13-201ENST00000484151 370 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RN7SL810P-201ENST00000493031 276 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC023424.2-201ENST00000493479 777 ntBASIC3.5□□□□□ -1.85
CDX1P47902 RPL23AP55-201ENST00000498163 452 ntBASIC3.5□□□□□ -1.85
CDX1P47902 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.5□□□□□ -1.85
CDX1P47902 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 AC006499.2-201ENST00000513470 337 ntBASIC3.5□□□□□ -1.85
CDX1P47902 SNORA70.14-201ENST00000516205 110 ntBASIC3.5□□□□□ -1.85
CDX1P47902 EEF1A1P37-201ENST00000522748 715 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.5□□□□□ -1.85
CDX1P47902 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDX1P47902 DUXAP1-201ENST00000556632 463 ntBASIC3.5□□□□□ -1.85
CDX1P47902 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 SNORD84-203ENST00000584275 78 ntBASIC3.5□□□□□ -1.85
CDX1P47902 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.5□□□□□ -1.85
CDX1P47902 AC006116.5-201ENST00000591936 559 ntBASIC3.5□□□□□ -1.85
CDX1P47902 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 AC026790.2-201ENST00000606282 430 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC090948.1-201ENST00000607464 549 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 AC063944.3-201ENST00000609969 533 ntBASIC3.5□□□□□ -1.85
CDX1P47902 MIR378J-201ENST00000611988 109 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC008993.2-201ENST00000631744 806 ntBASIC3.5□□□□□ -1.85
CDX1P47902 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.5□□□□□ -1.85
CDX1P47902 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 AL365440.1-201ENST00000436135 2167 ntBASIC3.5□□□□□ -1.85
CDX1P47902 CPHL1P-201ENST00000461341 3407 ntBASIC3.5□□□□□ -1.85
CDX1P47902 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
CDX1P47902 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.5□□□□□ -1.85
CDX1P47902 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDX1P47902 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 EXOC5P1-201ENST00000510543 1969 ntBASIC3.49□□□□□ -1.85
CDX1P47902 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.49□□□□□ -1.85
CDX1P47902 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDX1P47902 AP000568.1-201ENST00000282964 442 ntBASIC3.49□□□□□ -1.85
CDX1P47902 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms