Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC037471.2-201ENST00000564941 598 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.69□□□□□ -1.82
BRCC3P46736 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.69□□□□□ -1.82
BRCC3P46736 BNIP3P4-201ENST00000604946 565 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCC3P46736 AL359535.1-201ENST00000612100 1087 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
BRCC3P46736 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 AC073055.1-201ENST00000456901 1621 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
BRCC3P46736 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCC3P46736 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCC3P46736 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRCC3P46736 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCC3P46736 ZNF33CP-201ENST00000432492 2030 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCC3P46736 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCC3P46736 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRCC3P46736 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BRCC3P46736 RNU6-353P-201ENST00000364266 108 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 RNU6-283P-201ENST00000364788 107 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 DNAJC19P6-201ENST00000401853 280 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 PTP4A1P7-201ENST00000423476 514 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 UBE2V1P5-201ENST00000440070 405 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AC004854.1-201ENST00000440356 349 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AL645638.1-201ENST00000440519 361 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AL591503.2-201ENST00000442314 1005 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 RPL9P32-201ENST00000464118 620 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AC104164.3-201ENST00000467363 1258 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC015724.1-201ENST00000478577 156 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 RPL32P34-201ENST00000486380 400 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 USP9YP5-201ENST00000511770 630 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 SNORA74D-201ENST00000516404 141 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AP001207.2-201ENST00000519490 539 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCC3P46736 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC023824.3-201ENST00000569003 562 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AL034351.1-201ENST00000605288 668 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCC3P46736 AL354976.1-201ENST00000613843 387 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 AC022960.3-201ENST00000619794 441 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC099654.9-201ENST00000637055 678 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCC3P46736 AC013437.2-201ENST00000639587 677 ntBASIC3.68□□□□□ -1.82
BRCC3P46736 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCC3P46736 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
BRCC3P46736 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCC3P46736 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCC3P46736 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRCC3P46736 AC138393.1-206ENST00000540997 1886 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 AC025263.3-201ENST00000622965 1396 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRCC3P46736 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCC3P46736 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 RNA5SP197-201ENST00000363357 119 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 RNU6-77P-201ENST00000410554 91 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCC3P46736 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.67□□□□□ -1.82
BRCC3P46736 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCC3P46736 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 AL050341.1-201ENST00000447743 313 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCC3P46736 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCC3P46736 BTF3P5-201ENST00000457252 467 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 RN7SL93P-201ENST00000463035 293 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCC3P46736 AP000893.1-201ENST00000474462 794 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCC3P46736 TPT1P8-201ENST00000510120 555 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 AC093752.1-206ENST00000511823 336 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 AC005798.1-201ENST00000513715 387 ntBASIC3.67□□□□□ -1.82
BRCC3P46736 PRELID3BP4-201ENST00000515476 571 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms