Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM23P36406 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM23P36406 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM23P36406 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM23P36406 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM23P36406 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM23P36406 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM23P36406 BNIP3P33-201ENST00000598912 569 ntBASIC3.66□□□□□ -1.82
TRIM23P36406 AL163642.2-201ENST00000604722 1019 ntBASIC3.66□□□□□ -1.82
TRIM23P36406 AL139022.2-201ENST00000606934 443 ntBASIC3.66□□□□□ -1.82
TRIM23P36406 U73479.1-201ENST00000618062 168 ntBASIC3.66□□□□□ -1.82
TRIM23P36406 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM23P36406 AC004808.1-201ENST00000627671 721 ntBASIC3.66□□□□□ -1.82
TRIM23P36406 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM23P36406 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM23P36406 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
TRIM23P36406 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM23P36406 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM23P36406 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
TRIM23P36406 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM23P36406 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM23P36406 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM23P36406 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.65□□□□□ -1.82
TRIM23P36406 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.82
TRIM23P36406 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM23P36406 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM23P36406 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM23P36406 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 MIR591-201ENST00000385290 95 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM23P36406 RPS7P9-201ENST00000414704 586 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC245054.1-201ENST00000420944 258 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC233981.1-201ENST00000423224 461 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC234064.1-201ENST00000436312 247 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM23P36406 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM23P36406 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AL358232.1-201ENST00000448030 501 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 SNORD105B-201ENST00000458770 79 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 RPL6P9-201ENST00000466502 859 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 TRBV12-2-201ENST00000489763 344 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM23P36406 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC118942.1-201ENST00000529674 1035 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM23P36406 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM23P36406 CCNG2P1-201ENST00000549521 1000 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC087897.1-201ENST00000550134 156 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 YWHAZP1-201ENST00000556286 722 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM23P36406 NIFKP8-201ENST00000560500 874 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM23P36406 AC011468.4-201ENST00000603942 409 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 SNORA50A-202ENST00000629536 136 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AC013437.2-201ENST00000639587 677 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
TRIM23P36406 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM23P36406 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM23P36406 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM23P36406 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM23P36406 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TRIM23P36406 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM23P36406 SNORA31-201ENST00000362607 130 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM23P36406 RNU6-298P-201ENST00000390888 96 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 SSXP10-201ENST00000402595 565 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 SFR1P2-201ENST00000421841 730 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 RPL21P109-201ENST00000422213 475 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM23P36406 AC244505.3-201ENST00000454598 187 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM23P36406 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM23P36406 GAPDHP39-201ENST00000481866 979 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 RNF138P1-201ENST00000502765 546 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM23P36406 AC119751.4-201ENST00000507498 357 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM23P36406 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM23P36406 TMEM248P1-201ENST00000510579 951 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AC104619.4-201ENST00000510773 249 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.64□□□□□ -1.83
TRIM23P36406 IGHV3-76-201ENST00000522465 295 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM23P36406 AL121766.1-201ENST00000547436 487 ntBASIC3.64□□□□□ -1.83
TRIM23P36406 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms