Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 GMCL1P2-201ENST00000605230 823 ntBASIC3.86□□□□□ -1.79
CPS1P31327 AC008121.2-201ENST00000614647 523 ntBASIC3.86□□□□□ -1.79
CPS1P31327 AL512643.1-201ENST00000635735 524 ntBASIC3.86□□□□□ -1.79
CPS1P31327 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CPS1P31327 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CPS1P31327 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.86□□□□□ -1.79
CPS1P31327 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CPS1P31327 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.86□□□□□ -1.79
CPS1P31327 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.86□□□□□ -1.79
CPS1P31327 SNORD114-1-201ENST00000362705 72 ntBASIC3.85□□□□□ -1.79
CPS1P31327 RNU1-87P-201ENST00000363727 170 ntBASIC3.85□□□□□ -1.79
CPS1P31327 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CPS1P31327 RNU6-76P-201ENST00000384060 104 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AL513043.1-201ENST00000439124 535 ntBASIC3.85□□□□□ -1.79
CPS1P31327 FAM103A2P-201ENST00000444122 354 ntBASIC3.85□□□□□ -1.79
CPS1P31327 CYCSP20-201ENST00000473154 315 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.85□□□□□ -1.79
CPS1P31327 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.85□□□□□ -1.79
CPS1P31327 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.85□□□□□ -1.79
CPS1P31327 AC009063.1-201ENST00000563342 702 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC022069.1-201ENST00000582910 658 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC241377.1-201ENST00000619797 406 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC026634.1-201ENST00000634369 198 ntBASIC3.85□□□□□ -1.79
CPS1P31327 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.85□□□□□ -1.79
CPS1P31327 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CPS1P31327 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.85□□□□□ -1.79
CPS1P31327 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CPS1P31327 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CPS1P31327 RNA5SP107-201ENST00000411358 122 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC107081.1-201ENST00000414975 361 ntBASIC3.85□□□□□ -1.79
CPS1P31327 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CPS1P31327 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.85□□□□□ -1.79
CPS1P31327 AADACP1-206ENST00000561502 1193 ntBASIC3.85□□□□□ -1.79
CPS1P31327 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.85□□□□□ -1.79
CPS1P31327 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.85□□□□□ -1.79
CPS1P31327 DCAF13P3-201ENST00000561147 1334 ntBASIC3.85□□□□□ -1.79
CPS1P31327 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CPS1P31327 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CPS1P31327 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CPS1P31327 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CPS1P31327 PWAR6-201ENST00000552334 4618 ntBASIC3.84□□□□□ -1.79
CPS1P31327 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 RN7SKP285-201ENST00000410137 318 ntBASIC3.84□□□□□ -1.8
CPS1P31327 AC105402.2-201ENST00000438503 358 ntBASIC3.84□□□□□ -1.8
CPS1P31327 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 AL353705.4-201ENST00000449661 238 ntBASIC3.84□□□□□ -1.8
CPS1P31327 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.84□□□□□ -1.8
CPS1P31327 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 AC093010.3-201ENST00000570269 15214 ntBASIC3.84□□□□□ -1.8
CPS1P31327 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
CPS1P31327 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CPS1P31327 AC004972.1-201ENST00000623934 2209 ntBASIC3.83□□□□□ -1.8
CPS1P31327 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CPS1P31327 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.83□□□□□ -1.8
CPS1P31327 VTA1P1-201ENST00000414044 866 ntBASIC3.83□□□□□ -1.8
CPS1P31327 AC245291.1-201ENST00000419501 328 ntBASIC3.83□□□□□ -1.8
CPS1P31327 AL137014.1-201ENST00000420490 1226 ntBASIC3.83□□□□□ -1.8
CPS1P31327 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.83□□□□□ -1.8
CPS1P31327 RN7SL442P-201ENST00000473804 320 ntBASIC3.83□□□□□ -1.8
CPS1P31327 SRIP1-201ENST00000489235 288 ntBASIC3.83□□□□□ -1.8
CPS1P31327 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.83□□□□□ -1.8
CPS1P31327 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.83□□□□□ -1.8
CPS1P31327 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CPS1P31327 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.83□□□□□ -1.8
CPS1P31327 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CPS1P31327 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CPS1P31327 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CPS1P31327 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
CPS1P31327 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CPS1P31327 RNU6-249P-201ENST00000363016 102 ntBASIC3.82□□□□□ -1.8
CPS1P31327 RPL31P1-201ENST00000398116 372 ntBASIC3.82□□□□□ -1.8
CPS1P31327 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 HMGN2P23-201ENST00000456759 269 ntBASIC3.82□□□□□ -1.8
CPS1P31327 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CPS1P31327 RNA5SP320-201ENST00000516263 124 ntBASIC3.82□□□□□ -1.8
CPS1P31327 RN7SKP282-201ENST00000516824 299 ntBASIC3.82□□□□□ -1.8
CPS1P31327 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.82□□□□□ -1.8
CPS1P31327 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.82□□□□□ -1.8
CPS1P31327 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
CPS1P31327 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 AP000919.1-202ENST00000581139 1264 ntBASIC3.82□□□□□ -1.8
CPS1P31327 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.82□□□□□ -1.8
CPS1P31327 AL355493.4-201ENST00000618530 292 ntBASIC3.82□□□□□ -1.8
CPS1P31327 AL353684.1-201ENST00000622677 1120 ntBASIC3.82□□□□□ -1.8
CPS1P31327 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.82□□□□□ -1.8
CPS1P31327 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CPS1P31327 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CPS1P31327 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CPS1P31327 RPL21P132-201ENST00000331267 462 ntBASIC3.81□□□□□ -1.8
CPS1P31327 RNA5SP383-201ENST00000362934 120 ntBASIC3.81□□□□□ -1.8
CPS1P31327 Y_RNA.164-201ENST00000363709 102 ntBASIC3.81□□□□□ -1.8
CPS1P31327 RNVU1-3-201ENST00000364313 161 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms