Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PTPN4P29074 CRYBB2P1-203ENST00000415709 538 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN4P29074 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN4P29074 OSTCP5-201ENST00000425293 453 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RPL36P19-201ENST00000430744 301 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 MTCYBP15-201ENST00000433123 1127 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 B3GNT2P1-201ENST00000434960 952 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC234064.1-201ENST00000436312 247 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN4P29074 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN4P29074 ELOCP13-201ENST00000443934 329 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN4P29074 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 Z99714.1-201ENST00000450463 807 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC078785.3-201ENST00000476607 425 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RPS4XP13-201ENST00000483219 789 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 FCF1P3-201ENST00000496394 590 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN4P29074 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN4P29074 RNU6-202P-201ENST00000515998 96 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RN7SKP116-201ENST00000516902 319 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RNU6-352P-201ENST00000516908 107 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AP001636.2-201ENST00000525517 696 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC019227.1-201ENST00000526902 510 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 MTCYBP41-201ENST00000528913 1123 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AP003066.2-201ENST00000529375 555 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 NIFKP8-201ENST00000560500 874 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN4P29074 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPN4P29074 AC087499.8-201ENST00000578406 226 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN4P29074 AC068620.3-201ENST00000602749 560 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AL391497.1-201ENST00000608671 547 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RNU6-1192P-201ENST00000612197 107 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 RNU6-489P-201ENST00000618289 107 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC244100.1-202ENST00000621554 382 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AL121594.5-201ENST00000631724 573 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN4P29074 BX649567.1-201ENST00000642071 1134 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN4P29074 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN4P29074 AL355578.1-201ENST00000607405 1328 ntBASIC3.68□□□□□ -1.82
PTPN4P29074 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN4P29074 ZNF37BP-203ENST00000452306 1352 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 ZNF285B-201ENST00000561698 1767 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU6-619P-201ENST00000365146 108 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 MT-TC-201ENST00000387405 66 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AL138880.1-201ENST00000405824 642 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU6-55P-201ENST00000411092 107 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU6-954P-201ENST00000411355 107 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 MTND4P22-201ENST00000413116 1169 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 PTP4A1P7-201ENST00000423476 514 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RPS6P14-201ENST00000425165 719 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC017083.1-201ENST00000428093 483 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 YME1L1P1-201ENST00000429435 297 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC010881.1-201ENST00000433830 235 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN4P29074 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN4P29074 RPS15AP1-201ENST00000457423 391 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU7-140P-201ENST00000459546 60 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.67□□□□□ -1.82
PTPN4P29074 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC108941.1-201ENST00000502853 530 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC110768.1-201ENST00000509222 400 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC104057.1-201ENST00000515547 497 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU1-95P-201ENST00000516357 160 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 RNU1-128P-201ENST00000516704 160 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC026403.1-201ENST00000518938 295 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN4P29074 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN4P29074 AC107954.1-201ENST00000565906 727 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN4P29074 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN4P29074 AC124016.2-201ENST00000610058 665 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AC007275.1-201ENST00000621243 671 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN4P29074 AL049777.1-201ENST00000622740 518 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
PTPN4P29074 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN4P29074 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms