Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 OR2X1P-201ENST00000421144 687 ntBASIC2.71□□□□□ -1.98
VCANP13611 AC022795.1-201ENST00000473808 480 ntBASIC2.71□□□□□ -1.98
VCANP13611 AC106872.3-201ENST00000495104 446 ntBASIC2.71□□□□□ -1.98
VCANP13611 RNA5SP490-201ENST00000517141 136 ntBASIC2.71□□□□□ -1.98
VCANP13611 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
VCANP13611 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.71□□□□□ -1.98
VCANP13611 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.71□□□□□ -1.98
VCANP13611 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.71□□□□□ -1.98
VCANP13611 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VCANP13611 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VCANP13611 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
VCANP13611 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
VCANP13611 AC004866.2-201ENST00000438285 481 ntBASIC2.7□□□□□ -1.98
VCANP13611 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
VCANP13611 AC019080.5-201ENST00000624891 757 ntBASIC2.7□□□□□ -1.98
VCANP13611 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VCANP13611 AC004520.1-201ENST00000608362 1413 ntBASIC2.7□□□□□ -1.98
VCANP13611 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VCANP13611 RPL12P25-201ENST00000455592 494 ntBASIC2.7□□□□□ -1.98
VCANP13611 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
VCANP13611 AC108078.2-201ENST00000510750 236 ntBASIC2.7□□□□□ -1.98
VCANP13611 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
VCANP13611 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 AL024474.1-201ENST00000404655 591 ntBASIC2.7□□□□□ -1.98
VCANP13611 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.7□□□□□ -1.98
VCANP13611 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.7□□□□□ -1.98
VCANP13611 RPL5P13-201ENST00000462840 709 ntBASIC2.7□□□□□ -1.98
VCANP13611 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.7□□□□□ -1.98
VCANP13611 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 RMST_8.1-201ENST00000610287 165 ntBASIC2.7□□□□□ -1.98
VCANP13611 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.7□□□□□ -1.98
VCANP13611 AL596275.2-204ENST00000641628 552 ntBASIC2.7□□□□□ -1.98
VCANP13611 AL596275.2-206ENST00000641957 626 ntBASIC2.7□□□□□ -1.98
VCANP13611 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VCANP13611 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.7□□□□□ -1.98
VCANP13611 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCANP13611 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.69□□□□□ -1.98
VCANP13611 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCANP13611 BTG3P1-201ENST00000435859 716 ntBASIC2.69□□□□□ -1.98
VCANP13611 OR6K1P-201ENST00000456766 971 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC126121.1-201ENST00000482313 553 ntBASIC2.69□□□□□ -1.98
VCANP13611 RNU6-295P-201ENST00000516901 104 ntBASIC2.69□□□□□ -1.98
VCANP13611 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.69□□□□□ -1.98
VCANP13611 AC007423.1-201ENST00000605009 627 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC023813.4-201ENST00000607580 580 ntBASIC2.69□□□□□ -1.98
VCANP13611 MIR6845-201ENST00000613182 61 ntBASIC2.69□□□□□ -1.98
VCANP13611 AL356490.1-201ENST00000623079 479 ntBASIC2.69□□□□□ -1.98
VCANP13611 MFSD8-245ENST00000641743 948 ntBASIC2.69□□□□□ -1.98
VCANP13611 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VCANP13611 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 DNAJC19P4-201ENST00000440115 345 ntBASIC2.69□□□□□ -1.98
VCANP13611 RPL23AP42-201ENST00000471152 471 ntBASIC2.69□□□□□ -1.98
VCANP13611 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.69□□□□□ -1.98
VCANP13611 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.69□□□□□ -1.98
VCANP13611 AL391156.1-201ENST00000554965 554 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.69□□□□□ -1.98
VCANP13611 AC128687.1-201ENST00000605304 619 ntBASIC2.69□□□□□ -1.98
VCANP13611 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC092593.1-201ENST00000515413 1815 ntBASIC2.69□□□□□ -1.98
VCANP13611 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.69□□□□□ -1.98
VCANP13611 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCANP13611 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCANP13611 AL512646.1-201ENST00000269395 1077 ntBASIC2.69□□□□□ -1.98
VCANP13611 MIR378A-201ENST00000362177 66 ntBASIC2.69□□□□□ -1.98
VCANP13611 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.69□□□□□ -1.98
VCANP13611 RPS6P2-201ENST00000454208 705 ntBASIC2.69□□□□□ -1.98
VCANP13611 RPL23AP31-201ENST00000456160 467 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC087385.1-201ENST00000475062 312 ntBASIC2.69□□□□□ -1.98
VCANP13611 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
VCANP13611 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.69□□□□□ -1.98
VCANP13611 AL022322.2-201ENST00000624072 20397 ntBASIC2.68□□□□□ -1.98
VCANP13611 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 RNY1P10-201ENST00000363268 113 ntBASIC2.68□□□□□ -1.98
VCANP13611 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
VCANP13611 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 RN7SKP24-201ENST00000515888 284 ntBASIC2.68□□□□□ -1.98
VCANP13611 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.68□□□□□ -1.98
VCANP13611 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 RPL23AP71-201ENST00000470966 469 ntBASIC2.68□□□□□ -1.98
VCANP13611 AP001086.1-201ENST00000494882 321 ntBASIC2.68□□□□□ -1.98
VCANP13611 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.68□□□□□ -1.98
VCANP13611 AC095038.3-201ENST00000634439 195 ntBASIC2.68□□□□□ -1.98
VCANP13611 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCANP13611 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.68□□□□□ -1.98
VCANP13611 NR1H5P-201ENST00000452683 1377 ntBASIC2.68□□□□□ -1.98
VCANP13611 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
VCANP13611 Y_RNA.224-201ENST00000364308 111 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms