Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL353743.4-201ENST00000422653 1547 ntBASIC4.42□□□□□ -1.7
CFTRP13569 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CFTRP13569 HMGB3P23-201ENST00000414981 585 ntBASIC4.41□□□□□ -1.7
CFTRP13569 HMGB1P18-201ENST00000438801 619 ntBASIC4.41□□□□□ -1.7
CFTRP13569 HMGN1P5-201ENST00000448591 263 ntBASIC4.41□□□□□ -1.7
CFTRP13569 AL121877.1-201ENST00000453704 622 ntBASIC4.41□□□□□ -1.7
CFTRP13569 RPS6P2-201ENST00000454208 705 ntBASIC4.41□□□□□ -1.7
CFTRP13569 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.41□□□□□ -1.7
CFTRP13569 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.41□□□□□ -1.7
CFTRP13569 AC005046.1-201ENST00000608515 625 ntBASIC4.41□□□□□ -1.7
CFTRP13569 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CFTRP13569 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CFTRP13569 SPATA2P1-201ENST00000431223 2055 ntBASIC4.4□□□□□ -1.7
CFTRP13569 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CFTRP13569 RPL21P132-201ENST00000331267 462 ntBASIC4.4□□□□□ -1.71
CFTRP13569 MIR181A2-201ENST00000384863 110 ntBASIC4.4□□□□□ -1.71
CFTRP13569 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.4□□□□□ -1.71
CFTRP13569 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.4□□□□□ -1.71
CFTRP13569 RN7SL636P-201ENST00000497504 294 ntBASIC4.4□□□□□ -1.71
CFTRP13569 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CFTRP13569 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.4□□□□□ -1.71
CFTRP13569 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.4□□□□□ -1.71
CFTRP13569 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.4□□□□□ -1.71
CFTRP13569 AC099654.11-201ENST00000638857 294 ntBASIC4.4□□□□□ -1.71
CFTRP13569 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CFTRP13569 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CFTRP13569 MTCO1P22-201ENST00000604619 1360 ntBASIC4.39□□□□□ -1.71
CFTRP13569 BTF3P7-201ENST00000407097 488 ntBASIC4.39□□□□□ -1.71
CFTRP13569 PISRT1-201ENST00000626175 531 ntBASIC4.39□□□□□ -1.71
CFTRP13569 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.39□□□□□ -1.71
CFTRP13569 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CFTRP13569 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CFTRP13569 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.39□□□□□ -1.71
CFTRP13569 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CFTRP13569 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CFTRP13569 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CFTRP13569 NANOGP5-201ENST00000424456 877 ntBASIC4.38□□□□□ -1.71
CFTRP13569 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.38□□□□□ -1.71
CFTRP13569 RN7SL75P-201ENST00000461926 281 ntBASIC4.38□□□□□ -1.71
CFTRP13569 RN7SL442P-201ENST00000473804 320 ntBASIC4.38□□□□□ -1.71
CFTRP13569 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
CFTRP13569 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.38□□□□□ -1.71
CFTRP13569 AC009977.1-201ENST00000586015 570 ntBASIC4.38□□□□□ -1.71
CFTRP13569 Z99129.2-201ENST00000619967 314 ntBASIC4.38□□□□□ -1.71
CFTRP13569 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
CFTRP13569 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CFTRP13569 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CFTRP13569 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CFTRP13569 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
CFTRP13569 OR11H5P-202ENST00000641612 1325 ntBASIC4.38□□□□□ -1.71
CFTRP13569 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CFTRP13569 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.37□□□□□ -1.71
CFTRP13569 AL592437.1-201ENST00000443781 492 ntBASIC4.37□□□□□ -1.71
CFTRP13569 AC112184.1-201ENST00000505179 312 ntBASIC4.37□□□□□ -1.71
CFTRP13569 TRAV37-201ENST00000553906 342 ntBASIC4.37□□□□□ -1.71
CFTRP13569 CR381653.2-201ENST00000624041 768 ntBASIC4.37□□□□□ -1.71
CFTRP13569 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CFTRP13569 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CFTRP13569 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.37□□□□□ -1.71
CFTRP13569 AC012078.1-201ENST00000405035 1646 ntBASIC4.37□□□□□ -1.71
CFTRP13569 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.37□□□□□ -1.71
CFTRP13569 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.37□□□□□ -1.71
CFTRP13569 AC016687.1-201ENST00000482574 353 ntBASIC4.37□□□□□ -1.71
CFTRP13569 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.37□□□□□ -1.71
CFTRP13569 SNORA9.3-201ENST00000516383 129 ntBASIC4.37□□□□□ -1.71
CFTRP13569 IGLVIV-53-201ENST00000520107 367 ntBASIC4.37□□□□□ -1.71
CFTRP13569 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.37□□□□□ -1.71
CFTRP13569 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CFTRP13569 ZNF72P-201ENST00000425869 1908 ntBASIC4.36□□□□□ -1.71
CFTRP13569 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CFTRP13569 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CFTRP13569 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CFTRP13569 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CFTRP13569 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CFTRP13569 MTCO1P9-201ENST00000505577 1534 ntBASIC4.36□□□□□ -1.71
CFTRP13569 RNU6-76P-201ENST00000384060 104 ntBASIC4.36□□□□□ -1.71
CFTRP13569 MTCO1P39-201ENST00000426148 480 ntBASIC4.36□□□□□ -1.71
CFTRP13569 AC011816.1-201ENST00000441346 546 ntBASIC4.36□□□□□ -1.71
CFTRP13569 RPL36AP51-201ENST00000487216 318 ntBASIC4.36□□□□□ -1.71
CFTRP13569 RPS26P24-201ENST00000497656 331 ntBASIC4.36□□□□□ -1.71
CFTRP13569 AC100870.1-201ENST00000522035 505 ntBASIC4.36□□□□□ -1.71
CFTRP13569 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.36□□□□□ -1.71
CFTRP13569 SNORA35B-201ENST00000607417 129 ntBASIC4.36□□□□□ -1.71
CFTRP13569 AC008121.2-201ENST00000614647 523 ntBASIC4.36□□□□□ -1.71
CFTRP13569 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CFTRP13569 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CFTRP13569 RNU6-805P-201ENST00000365643 106 ntBASIC4.35□□□□□ -1.71
CFTRP13569 RN7SKP247-201ENST00000411094 308 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AC002524.1-201ENST00000411687 547 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AC080125.1-201ENST00000414888 684 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AC096638.1-201ENST00000444678 216 ntBASIC4.35□□□□□ -1.71
CFTRP13569 RPL7P12-201ENST00000446719 750 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AL353705.4-201ENST00000449661 238 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AC105918.1-201ENST00000474399 838 ntBASIC4.35□□□□□ -1.71
CFTRP13569 RPS27AP9-201ENST00000477681 438 ntBASIC4.35□□□□□ -1.71
CFTRP13569 CKS1BP1-201ENST00000555221 240 ntBASIC4.35□□□□□ -1.71
CFTRP13569 AL355836.1-201ENST00000555951 870 ntBASIC4.35□□□□□ -1.71
CFTRP13569 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.34□□□□□ -1.71
CFTRP13569 AL137014.1-201ENST00000420490 1226 ntBASIC4.34□□□□□ -1.71
CFTRP13569 RPL31P12-201ENST00000422587 358 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms