Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.04□□□□□ -1.92
COL11A1P12107 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.04□□□□□ -1.92
COL11A1P12107 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL11A1P12107 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL11A1P12107 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.03□□□□□ -1.92
COL11A1P12107 AL355379.1-201ENST00000405542 640 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 RN7SKP223-201ENST00000410582 62 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.03□□□□□ -1.92
COL11A1P12107 ANXA2P1-201ENST00000505539 926 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.03□□□□□ -1.92
COL11A1P12107 AC107918.3-201ENST00000533272 382 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL11A1P12107 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.03□□□□□ -1.92
COL11A1P12107 AL121839.1-201ENST00000556233 1185 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.92
COL11A1P12107 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.03□□□□□ -1.92
COL11A1P12107 FRG1DP-201ENST00000635586 771 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL11A1P12107 ZNF542P-204ENST00000482727 1305 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.03□□□□□ -1.92
COL11A1P12107 ZNF658B-202ENST00000615961 3375 ntBASIC3.03□□□□□ -1.92
COL11A1P12107 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL11A1P12107 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL11A1P12107 OR11H5P-202ENST00000641612 1325 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.03□□□□□ -1.93
COL11A1P12107 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.03□□□□□ -1.93
COL11A1P12107 AC099063.2-201ENST00000446360 662 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 MTND4LP12-201ENST00000448237 295 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 AC098583.1-201ENST00000480875 255 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
COL11A1P12107 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.03□□□□□ -1.93
COL11A1P12107 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL11A1P12107 VN1R78P-201ENST00000597393 564 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 BDH2P1-201ENST00000602288 736 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 AP002967.1-201ENST00000624203 539 ntBASIC3.03□□□□□ -1.93
COL11A1P12107 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL11A1P12107 AC092881.1-201ENST00000638218 2733 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL11A1P12107 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
COL11A1P12107 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
COL11A1P12107 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.02□□□□□ -1.93
COL11A1P12107 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.02□□□□□ -1.93
COL11A1P12107 AC104687.1-201ENST00000485829 412 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.02□□□□□ -1.93
COL11A1P12107 AP003122.3-201ENST00000526316 255 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 AP002770.2-201ENST00000543613 532 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
COL11A1P12107 AC083760.1-201ENST00000589621 670 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.02□□□□□ -1.93
COL11A1P12107 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL11A1P12107 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
COL11A1P12107 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL11A1P12107 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.02□□□□□ -1.93
COL11A1P12107 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL11A1P12107 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL11A1P12107 SNORA81-201ENST00000408493 178 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.01□□□□□ -1.93
COL11A1P12107 RPS15AP6-201ENST00000420703 385 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 AC005189.1-201ENST00000431286 310 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 RNU7-170P-201ENST00000459303 61 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.01□□□□□ -1.93
COL11A1P12107 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.01□□□□□ -1.93
COL11A1P12107 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.01□□□□□ -1.93
COL11A1P12107 AC100870.1-201ENST00000522035 505 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.01□□□□□ -1.93
COL11A1P12107 HMGB3P26-201ENST00000560051 582 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 AC106734.1-201ENST00000568646 663 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.01□□□□□ -1.93
COL11A1P12107 AC096586.2-201ENST00000610260 441 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL11A1P12107 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.01□□□□□ -1.93
COL11A1P12107 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
COL11A1P12107 AL450326.2-201ENST00000421913 1962 ntBASIC3.01□□□□□ -1.93
COL11A1P12107 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL11A1P12107 RNU6-1320P-201ENST00000390838 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 RNU6-1269P-201ENST00000391139 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 MTCO3P31-201ENST00000405526 789 ntBASIC3□□□□□ -1.93
COL11A1P12107 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3□□□□□ -1.93
COL11A1P12107 RPLP0P7-201ENST00000416050 667 ntBASIC3□□□□□ -1.93
COL11A1P12107 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3□□□□□ -1.93
COL11A1P12107 RNU6-599P-201ENST00000459383 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 RNU6-1193P-201ENST00000459461 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 AP000916.1-201ENST00000533869 835 ntBASIC3□□□□□ -1.93
COL11A1P12107 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3□□□□□ -1.93
COL11A1P12107 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
COL11A1P12107 SNORD39.2-201ENST00000579995 76 ntBASIC3□□□□□ -1.93
COL11A1P12107 AC067838.1-201ENST00000606064 577 ntBASIC3□□□□□ -1.93
COL11A1P12107 RNU6-368P-201ENST00000620928 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 RNU6-538P-201ENST00000622329 107 ntBASIC3□□□□□ -1.93
COL11A1P12107 CR381653.2-201ENST00000624041 768 ntBASIC3□□□□□ -1.93
COL11A1P12107 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
COL11A1P12107 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL11A1P12107 RNU6-984P-201ENST00000363236 109 ntBASIC3□□□□□ -1.93
COL11A1P12107 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3□□□□□ -1.93
COL11A1P12107 SNRPGP5-201ENST00000456003 220 ntBASIC3□□□□□ -1.93
COL11A1P12107 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3□□□□□ -1.93
COL11A1P12107 RN7SKP283-201ENST00000517197 270 ntBASIC3□□□□□ -1.93
COL11A1P12107 UBTFL10-201ENST00000528532 562 ntBASIC3□□□□□ -1.93
COL11A1P12107 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms