Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MTND4LP24-201ENST00000572277 291 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 MIR3200-201ENST00000580767 85 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AP004372.1-201ENST00000604842 844 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC090525.3-201ENST00000605601 189 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC091953.5-201ENST00000622919 233 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 MTND5P19-201ENST00000424872 1794 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC091152.2-201ENST00000591628 2569 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AL139132.1-201ENST00000431587 344 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 MED6P1-201ENST00000439659 713 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 RPS7P5-201ENST00000441482 581 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 RPS4XP13-201ENST00000483219 789 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 SCGB1D5P-201ENST00000515134 247 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 FAM60DP-201ENST00000524174 632 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 MIR548Y-201ENST00000582739 110 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC083760.1-201ENST00000589621 670 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC069304.3-201ENST00000603938 1084 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 CYCSP41-201ENST00000616920 296 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC006065.5-201ENST00000623427 349 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DQB2P05538 AC021755.1-201ENST00000559747 1447 ntBASIC2.93□□□□□ -1.94
HLA-DQB2P05538 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 OR5H2-201ENST00000355273 945 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 RNU1-140P-201ENST00000365040 165 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 SNORA44-201ENST00000384584 132 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC004987.3-201ENST00000413879 771 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 S100A11P2-201ENST00000467589 312 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 RPL5P23-201ENST00000496040 868 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 PTP4A1P6-201ENST00000531034 478 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AP004242.1-201ENST00000533701 349 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC022080.3-201ENST00000544433 482 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC055876.1-202ENST00000567053 138 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 LLPHP1-201ENST00000603571 367 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 RNA5SP108-201ENST00000605921 117 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC113194.1-201ENST00000606037 500 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC135803.1-201ENST00000608748 565 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AL020991.1-201ENST00000612314 373 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQB2P05538 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 ZNF33CP-201ENST00000432492 2030 ntBASIC2.92□□□□□ -1.94
HLA-DQB2P05538 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 RNU6-761P-201ENST00000384148 107 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 MIR153-1-201ENST00000384914 90 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 HMGB1P10-201ENST00000395823 563 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 HSPE1P26-201ENST00000405341 275 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 EEF1A1P41-201ENST00000414667 207 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AL451074.5-201ENST00000415894 435 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC008280.1-201ENST00000418851 412 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC112653.1-201ENST00000443851 386 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC023512.1-201ENST00000444513 499 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 NANOGNBP1-201ENST00000448444 480 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC140076.1-201ENST00000449897 361 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 NIPA2P5-201ENST00000452282 464 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 OR7L1P-201ENST00000456181 380 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC083906.5-201ENST00000503722 328 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC090071.1-201ENST00000507713 644 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC110792.2-201ENST00000510278 224 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms