Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
APOBP04114 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 SNORA70E-201ENST00000384492 135 ntBASIC1.63□□□□□ -2.15
APOBP04114 MIR7-2-201ENST00000384970 110 ntBASIC1.63□□□□□ -2.15
APOBP04114 Z98742.2-201ENST00000431564 187 ntBASIC1.63□□□□□ -2.15
APOBP04114 AL513043.1-201ENST00000439124 535 ntBASIC1.63□□□□□ -2.15
APOBP04114 NARSP2-201ENST00000518524 679 ntBASIC1.63□□□□□ -2.15
APOBP04114 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.63□□□□□ -2.15
APOBP04114 MTND4P10-201ENST00000446199 1363 ntBASIC1.63□□□□□ -2.15
APOBP04114 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.63□□□□□ -2.15
APOBP04114 SNORA46-201ENST00000384762 135 ntBASIC1.63□□□□□ -2.15
APOBP04114 AL591416.1-201ENST00000404015 867 ntBASIC1.63□□□□□ -2.15
APOBP04114 RPS7P13-201ENST00000413955 498 ntBASIC1.63□□□□□ -2.15
APOBP04114 ST13P14-201ENST00000474095 734 ntBASIC1.63□□□□□ -2.15
APOBP04114 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.63□□□□□ -2.15
APOBP04114 SNORA35B-201ENST00000607417 129 ntBASIC1.63□□□□□ -2.15
APOBP04114 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.63□□□□□ -2.15
APOBP04114 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
APOBP04114 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
APOBP04114 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
APOBP04114 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 MIR592-201ENST00000384959 97 ntBASIC1.63□□□□□ -2.15
APOBP04114 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
APOBP04114 AL009174.1-201ENST00000426577 416 ntBASIC1.63□□□□□ -2.15
APOBP04114 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.63□□□□□ -2.15
APOBP04114 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.63□□□□□ -2.15
APOBP04114 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.63□□□□□ -2.15
APOBP04114 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
APOBP04114 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOBP04114 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
APOBP04114 FCF1P1-201ENST00000432690 571 ntBASIC1.62□□□□□ -2.15
APOBP04114 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.62□□□□□ -2.15
APOBP04114 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 OR4G11P-201ENST00000492842 939 ntBASIC1.62□□□□□ -2.15
APOBP04114 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 AC025034.2-201ENST00000623264 286 ntBASIC1.62□□□□□ -2.15
APOBP04114 AC103798.2-201ENST00000624292 632 ntBASIC1.62□□□□□ -2.15
APOBP04114 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.62□□□□□ -2.15
APOBP04114 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
APOBP04114 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 PPIAP17-201ENST00000438507 471 ntBASIC1.62□□□□□ -2.15
APOBP04114 HMGB1P25-201ENST00000468402 607 ntBASIC1.62□□□□□ -2.15
APOBP04114 OR5BN1P-201ENST00000532955 829 ntBASIC1.62□□□□□ -2.15
APOBP04114 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.62□□□□□ -2.15
APOBP04114 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.62□□□□□ -2.15
APOBP04114 AC091564.4-201ENST00000533934 2194 ntBASIC1.62□□□□□ -2.15
APOBP04114 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
APOBP04114 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
APOBP04114 AC011037.1-201ENST00000483964 558 ntBASIC1.62□□□□□ -2.15
APOBP04114 AC034244.2-201ENST00000514668 858 ntBASIC1.62□□□□□ -2.15
APOBP04114 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBP04114 AC008277.2-201ENST00000605196 797 ntBASIC1.62□□□□□ -2.15
APOBP04114 CR381653.2-201ENST00000624041 768 ntBASIC1.62□□□□□ -2.15
APOBP04114 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
APOBP04114 U3.11-201ENST00000364476 212 ntBASIC1.61□□□□□ -2.15
APOBP04114 RNA5SP88-201ENST00000365560 109 ntBASIC1.61□□□□□ -2.15
APOBP04114 RN7SKP58-201ENST00000411010 305 ntBASIC1.61□□□□□ -2.15
APOBP04114 OR9N1P-201ENST00000491296 333 ntBASIC1.61□□□□□ -2.15
APOBP04114 SNORA64.4-201ENST00000516632 81 ntBASIC1.61□□□□□ -2.15
APOBP04114 CKS1BP1-201ENST00000555221 240 ntBASIC1.61□□□□□ -2.15
APOBP04114 AC022960.2-201ENST00000616300 666 ntBASIC1.61□□□□□ -2.15
APOBP04114 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
APOBP04114 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOBP04114 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.61□□□□□ -2.15
APOBP04114 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.61□□□□□ -2.15
APOBP04114 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
APOBP04114 AL356292.1-201ENST00000283110 373 ntBASIC1.61□□□□□ -2.15
APOBP04114 AL023284.1-201ENST00000403956 276 ntBASIC1.61□□□□□ -2.15
APOBP04114 Y_RNA.595-201ENST00000410403 105 ntBASIC1.61□□□□□ -2.15
APOBP04114 ATG3P1-201ENST00000419507 911 ntBASIC1.61□□□□□ -2.15
APOBP04114 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOBP04114 OR4K7P-201ENST00000580232 945 ntBASIC1.61□□□□□ -2.15
APOBP04114 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOBP04114 MIR1291-201ENST00000627649 87 ntBASIC1.61□□□□□ -2.15
APOBP04114 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
APOBP04114 Y_RNA.540-201ENST00000384638 111 ntBASIC1.61□□□□□ -2.15
APOBP04114 MIR708-201ENST00000390708 88 ntBASIC1.61□□□□□ -2.15
APOBP04114 AL024474.1-201ENST00000404655 591 ntBASIC1.61□□□□□ -2.15
APOBP04114 AL583834.1-201ENST00000406943 343 ntBASIC1.61□□□□□ -2.15
APOBP04114 RPL23AP36-201ENST00000413895 458 ntBASIC1.61□□□□□ -2.15
APOBP04114 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.61□□□□□ -2.15
APOBP04114 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms