Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
CHRNA1P02708 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.75□□□□□ -1.81
CHRNA1P02708 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.75□□□□□ -1.81
CHRNA1P02708 RNU6-481P-201ENST00000384194 107 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CHRNA1P02708 RSL24D1P1-201ENST00000404972 493 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.75□□□□□ -1.81
CHRNA1P02708 AL445183.3-201ENST00000414168 502 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 AC127537.2-201ENST00000439258 465 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 MTND1P33-201ENST00000446251 917 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC010307.1-201ENST00000467206 836 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 OR5H3P-201ENST00000502817 919 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 MTCO2P9-201ENST00000503214 694 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.75□□□□□ -1.81
CHRNA1P02708 AC021678.1-201ENST00000505195 936 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 RN7SKP277-201ENST00000516895 283 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 OR4R2P-201ENST00000530815 597 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 MIR4276-201ENST00000584832 70 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 CKS1BP3-201ENST00000600888 237 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AL034351.1-201ENST00000605288 668 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.75□□□□□ -1.81
CHRNA1P02708 VN1R9P-201ENST00000614184 867 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.75□□□□□ -1.81
CHRNA1P02708 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CHRNA1P02708 AC073073.2-201ENST00000609827 2578 ntBASIC3.75□□□□□ -1.81
CHRNA1P02708 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHRNA1P02708 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.74□□□□□ -1.81
CHRNA1P02708 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.74□□□□□ -1.81
CHRNA1P02708 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AC016716.1-201ENST00000265882 708 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 RNA5SP374-201ENST00000362939 125 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 Y_RNA.111-201ENST00000363248 100 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 SNORA48.5-201ENST00000391143 135 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 HMGN1P24-201ENST00000412282 298 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.74□□□□□ -1.81
CHRNA1P02708 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 BX276092.4-201ENST00000452056 248 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AC008379.1-201ENST00000463655 464 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 RPL6P9-201ENST00000466502 859 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 RN7SL330P-201ENST00000469709 307 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AC015724.1-201ENST00000478577 156 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 MTCO1P4-201ENST00000520516 1409 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AP000926.4-201ENST00000527351 454 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHRNA1P02708 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.74□□□□□ -1.81
CHRNA1P02708 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.74□□□□□ -1.81
CHRNA1P02708 AC124283.4-201ENST00000581815 456 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.74□□□□□ -1.81
CHRNA1P02708 Z83843.1-201ENST00000604070 3685 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 Z82195.1-201ENST00000604558 398 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AC026741.1-201ENST00000605892 482 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 AC022079.2-201ENST00000619739 566 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 U7.8-201ENST00000619968 63 ntBASIC3.74□□□□□ -1.81
CHRNA1P02708 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CHRNA1P02708 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CHRNA1P02708 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHRNA1P02708 AC107081.3-201ENST00000612715 2034 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 AC091152.2-201ENST00000591628 2569 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CHRNA1P02708 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHRNA1P02708 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHRNA1P02708 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CHRNA1P02708 MIR634-201ENST00000385208 97 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 RNU2-21P-201ENST00000410368 188 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 RPL7P44-201ENST00000424827 742 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 OR51AB1P-201ENST00000429046 620 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 MRPS18BP2-201ENST00000434310 759 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 MTCYBP31-201ENST00000438855 1122 ntBASIC3.73□□□□□ -1.81
CHRNA1P02708 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.73□□□□□ -1.81
CHRNA1P02708 AC002542.1-201ENST00000440683 193 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms