Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL138721.1-201ENST00000616756 179 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DQA2P01906 AP006248.2-201ENST00000623309 592 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 AC055839.1-201ENST00000634467 498 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 CRYM-AS1-204ENST00000637983 556 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA2P01906 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA2P01906 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA2P01906 TEX21P-201ENST00000447107 1476 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 AP001273.1-201ENST00000624493 3152 ntBASIC4.03□□□□□ -1.76
HLA-DQA2P01906 AC097714.1-201ENST00000511272 1647 ntBASIC4.03□□□□□ -1.77
HLA-DQA2P01906 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RNU6-853P-201ENST00000364306 107 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RNU4-91P-201ENST00000364778 135 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RNU6-533P-201ENST00000384144 107 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RNU6-348P-201ENST00000384386 107 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SNORA40.3-201ENST00000390964 122 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL645927.1-201ENST00000396783 406 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RNU4-78P-201ENST00000410940 126 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RN7SKP100-201ENST00000411258 284 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 COX6CP17-201ENST00000421389 185 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SDCBPP1-201ENST00000440192 890 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL031667.1-201ENST00000440222 725 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL022238.1-201ENST00000442557 355 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ELOCP30-201ENST00000447108 299 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 USP9YP12-201ENST00000450481 570 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SSXP1-201ENST00000453640 473 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 HIGD1AP8-201ENST00000453927 274 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 TPT1P7-201ENST00000458300 517 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RPS4XP10-201ENST00000465034 731 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AP001025.2-201ENST00000490908 477 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 OR5H5P-201ENST00000503164 928 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 NDUFB5P1-201ENST00000508134 564 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AP002453.2-201ENST00000533503 320 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL391156.1-201ENST00000554965 554 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 RPL7P50-201ENST00000600588 727 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC025165.5-201ENST00000602802 578 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AL008729.2-201ENST00000606393 473 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC005332.10-201ENST00000612725 619 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC099669.2-201ENST00000616549 437 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC104010.1-201ENST00000616889 150 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC040168.1-201ENST00000623594 991 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC091925.2-201ENST00000625059 256 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SAGE4P-201ENST00000442271 3381 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 MAPK10-349ENST00000641767 3661 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA2P01906 AC017104.4-201ENST00000636283 1592 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 MTND4P5-201ENST00000435821 1374 ntBASIC4.02□□□□□ -1.77
HLA-DQA2P01906 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 DCAF13P1-201ENST00000495256 1330 ntBASIC4.01□□□□□ -1.77
HLA-DQA2P01906 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA2P01906 AP002001.2-201ENST00000529025 1469 ntBASIC4.01□□□□□ -1.77
HLA-DQA2P01906 RNU6-989P-201ENST00000362756 107 ntBASIC4.01□□□□□ -1.77
HLA-DQA2P01906 RNU6-339P-201ENST00000384310 107 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms