Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.22□□□□□ -2.21
USH2AO75445 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 AC128687.1-201ENST00000605304 619 ntBASIC1.22□□□□□ -2.21
USH2AO75445 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.22□□□□□ -2.21
USH2AO75445 uc_338.32-201ENST00000615087 172 ntBASIC1.22□□□□□ -2.21
USH2AO75445 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.22□□□□□ -2.21
USH2AO75445 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.22□□□□□ -2.21
USH2AO75445 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
USH2AO75445 BTG3P1-201ENST00000435859 716 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 RNA5SP320-201ENST00000516263 124 ntBASIC1.22□□□□□ -2.21
USH2AO75445 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
USH2AO75445 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 AL512646.1-201ENST00000269395 1077 ntBASIC1.22□□□□□ -2.21
USH2AO75445 HMGB3P18-201ENST00000406327 590 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC008638.3-201ENST00000603341 463 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AP005137.2-201ENST00000609238 400 ntBASIC1.22□□□□□ -2.21
USH2AO75445 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
USH2AO75445 DDX18P3-201ENST00000404856 2007 ntBASIC1.22□□□□□ -2.21
USH2AO75445 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.22□□□□□ -2.21
USH2AO75445 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.22□□□□□ -2.21
USH2AO75445 RN7SL283P-201ENST00000489055 303 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC1.22□□□□□ -2.21
USH2AO75445 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.22□□□□□ -2.21
USH2AO75445 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC018630.1-201ENST00000541376 925 ntBASIC1.22□□□□□ -2.21
USH2AO75445 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.22□□□□□ -2.21
USH2AO75445 OR7M1P-201ENST00000608946 533 ntBASIC1.22□□□□□ -2.21
USH2AO75445 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 RNY1P14-201ENST00000384426 108 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AL138827.1-201ENST00000402666 306 ntBASIC1.22□□□□□ -2.21
USH2AO75445 RPS15AP12-201ENST00000419498 388 ntBASIC1.22□□□□□ -2.21
USH2AO75445 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC1.22□□□□□ -2.21
USH2AO75445 AC010881.1-201ENST00000433830 235 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC108471.1-201ENST00000513977 287 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC096720.1-201ENST00000604441 183 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
USH2AO75445 SNORD39.4-201ENST00000620099 78 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC025048.6-202ENST00000627667 438 ntBASIC1.22□□□□□ -2.21
USH2AO75445 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
USH2AO75445 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
USH2AO75445 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AP002088.1-201ENST00000382740 395 ntBASIC1.21□□□□□ -2.22
USH2AO75445 ERHP2-201ENST00000402323 299 ntBASIC1.21□□□□□ -2.22
USH2AO75445 NANOGP6-201ENST00000429190 847 ntBASIC1.21□□□□□ -2.22
USH2AO75445 SCGB1D5P-201ENST00000515134 247 ntBASIC1.21□□□□□ -2.22
USH2AO75445 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.21□□□□□ -2.22
USH2AO75445 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC1.21□□□□□ -2.22
USH2AO75445 AL049555.1-201ENST00000562834 1933 ntBASIC1.21□□□□□ -2.22
USH2AO75445 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 CR381670.1-201ENST00000624291 1693 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AL023807.1-201ENST00000407932 359 ntBASIC1.21□□□□□ -2.22
USH2AO75445 RN7SKP32-201ENST00000410167 303 ntBASIC1.21□□□□□ -2.22
USH2AO75445 RNA5SP425-201ENST00000410336 112 ntBASIC1.21□□□□□ -2.22
USH2AO75445 MRPS18BP2-201ENST00000434310 759 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.21□□□□□ -2.22
USH2AO75445 AC010480.1-201ENST00000624823 684 ntBASIC1.21□□□□□ -2.22
USH2AO75445 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 AC104454.1-201ENST00000421341 1401 ntBASIC1.21□□□□□ -2.22
USH2AO75445 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
USH2AO75445 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 AL353746.1-201ENST00000566293 6881 ntBASIC1.21□□□□□ -2.22
USH2AO75445 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 RPL7P25-201ENST00000404151 721 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.21□□□□□ -2.22
USH2AO75445 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.21□□□□□ -2.22
USH2AO75445 MTCO3P11-201ENST00000455103 774 ntBASIC1.21□□□□□ -2.22
USH2AO75445 RPL30P9-201ENST00000465586 330 ntBASIC1.21□□□□□ -2.22
USH2AO75445 RPL21P6-201ENST00000479171 504 ntBASIC1.21□□□□□ -2.22
USH2AO75445 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.21□□□□□ -2.22
USH2AO75445 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 AC022069.1-201ENST00000582910 658 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AL136964.1-201ENST00000622038 2990 ntBASIC1.21□□□□□ -2.22
USH2AO75445 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH2AO75445 MTND5P6-201ENST00000422338 1798 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AL049610.1-201ENST00000423374 372 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AC093392.2-201ENST00000450682 337 ntBASIC1.21□□□□□ -2.22
USH2AO75445 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.21□□□□□ -2.22
USH2AO75445 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
USH2AO75445 AC011611.5-201ENST00000552477 578 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms