Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.75□□□□□ -1.49
SOX1O00570 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 RNA5SP191-201ENST00000362585 102 ntBASIC5.75□□□□□ -1.49
SOX1O00570 Y_RNA.373-201ENST00000365600 103 ntBASIC5.75□□□□□ -1.49
SOX1O00570 RNU6-1013P-201ENST00000384180 107 ntBASIC5.75□□□□□ -1.49
SOX1O00570 RNU6-574P-201ENST00000384265 107 ntBASIC5.75□□□□□ -1.49
SOX1O00570 AP003170.5-201ENST00000397185 335 ntBASIC5.75□□□□□ -1.49
SOX1O00570 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 RPL36AP36-201ENST00000418616 301 ntBASIC5.75□□□□□ -1.49
SOX1O00570 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 AC012181.1-201ENST00000479895 423 ntBASIC5.75□□□□□ -1.49
SOX1O00570 RPL21P99-201ENST00000480369 423 ntBASIC5.75□□□□□ -1.49
SOX1O00570 AC140172.1-201ENST00000502928 141 ntBASIC5.75□□□□□ -1.49
SOX1O00570 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 SNORD27.1-201ENST00000516319 72 ntBASIC5.75□□□□□ -1.49
SOX1O00570 Y_RNA.720-201ENST00000517166 92 ntBASIC5.75□□□□□ -1.49
SOX1O00570 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX1O00570 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX1O00570 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX1O00570 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SOX1O00570 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX1O00570 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 AC105224.1-201ENST00000587055 421 ntBASIC5.75□□□□□ -1.49
SOX1O00570 AC243654.2-201ENST00000612843 443 ntBASIC5.75□□□□□ -1.49
SOX1O00570 AC241377.1-201ENST00000619797 406 ntBASIC5.75□□□□□ -1.49
SOX1O00570 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX1O00570 AL596275.2-208ENST00000641192 594 ntBASIC5.75□□□□□ -1.49
SOX1O00570 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX1O00570 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
SOX1O00570 AC110373.1-201ENST00000505994 3505 ntBASIC5.75□□□□□ -1.49
SOX1O00570 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SOX1O00570 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX1O00570 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 RNU6-331P-201ENST00000384724 107 ntBASIC5.74□□□□□ -1.49
SOX1O00570 MIR600-201ENST00000385007 98 ntBASIC5.74□□□□□ -1.49
SOX1O00570 HSPA8P15-201ENST00000401676 786 ntBASIC5.74□□□□□ -1.49
SOX1O00570 SNORA11.1-201ENST00000408133 129 ntBASIC5.74□□□□□ -1.49
SOX1O00570 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX1O00570 RPL34P6-201ENST00000432390 345 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 RPS3AP52-201ENST00000435639 297 ntBASIC5.74□□□□□ -1.49
SOX1O00570 YWHAZP8-201ENST00000436935 731 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.74□□□□□ -1.49
SOX1O00570 ARL2BPP10-201ENST00000446487 531 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC005297.2-201ENST00000450430 606 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AL162739.1-201ENST00000450606 307 ntBASIC5.74□□□□□ -1.49
SOX1O00570 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX1O00570 HMGB1P15-201ENST00000453854 435 ntBASIC5.74□□□□□ -1.49
SOX1O00570 TRBV26-201ENST00000456572 344 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC005229.2-201ENST00000456995 399 ntBASIC5.74□□□□□ -1.49
SOX1O00570 VN1R17P-201ENST00000472048 1090 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC055855.1-201ENST00000489563 579 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX1O00570 AC004062.1-201ENST00000509926 645 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX1O00570 Y_RNA.665-201ENST00000516177 98 ntBASIC5.74□□□□□ -1.49
SOX1O00570 NARSP2-201ENST00000518524 679 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms