Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC012414.6-201ENST00000568241 401 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RPL23AP87-202ENST00000573039 466 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LARP7P2-201ENST00000575306 125 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC022655.2-201ENST00000577280 318 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC011477.5-201ENST00000586571 259 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RSL24D1P11-201ENST00000591045 491 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL161729.3-201ENST00000603533 673 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 BNIP3P11-201ENST00000603878 563 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL121873.1-201ENST00000616013 524 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC009878.1-201ENST00000621819 340 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL773545.4-201ENST00000637262 310 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL513478.4-201ENST00000641636 310 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC087190.4-201ENST00000574616 8334 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC012618.3-205ENST00000637896 1496 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 MTND4P26-201ENST00000415971 1359 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RNU6-501P-201ENST00000364072 100 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 EIF5P1-201ENST00000400019 1231 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 SSXP10-201ENST00000402595 565 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RPL31P2-201ENST00000413849 377 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RPS27AP7-201ENST00000422792 455 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 OR4F13P-201ENST00000428478 931 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL589823.1-201ENST00000429577 183 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC011742.1-201ENST00000431448 434 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RPS29P33-201ENST00000456717 146 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RPS4XP15-201ENST00000489210 795 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RNF138P1-201ENST00000502765 546 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 TMEM251P1-201ENST00000503717 318 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 RNU7-143P-201ENST00000516781 65 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC022790.1-201ENST00000522872 204 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC105233.3-201ENST00000531125 744 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC022882.1-201ENST00000532142 501 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 OR6C7P-201ENST00000547875 934 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC119751.7-201ENST00000600494 245 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC090425.2-201ENST00000608818 501 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC025594.3-201ENST00000613068 790 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC090582.1-201ENST00000636321 199 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 FAM157B-203ENST00000639350 358 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 AP002907.1-201ENST00000606361 1430 ntBASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TCRBV7S3A2A0A539 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL031985.3-201ENST00000565390 2449 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms