Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC023161.2-201ENST00000551218 780 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC024909.2-201ENST00000553035 286 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AL161713.1-201ENST00000555538 145 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC012414.6-201ENST00000568241 401 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC141257.3-201ENST00000572906 215 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AP001004.1-201ENST00000582468 324 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AL008729.2-201ENST00000606393 473 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 AC009318.4-201ENST00000620496 486 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 CYP3A51P-201ENST00000633513 256 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 MIR492-201ENST00000638676 116 ntBASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3DA0A087WVF3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AL022578.1-201ENST00000439330 1433 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 U3.4-201ENST00000363352 213 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC097374.1-203ENST00000400783 485 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 CYCSP46-201ENST00000423569 204 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 EIF1P3-201ENST00000423841 334 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 OR4C10P-201ENST00000434991 931 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 RPL23AP74-201ENST00000437246 471 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 MTCO2P7-201ENST00000446518 666 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 MTCO1P27-201ENST00000448269 226 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 ARPC3P5-201ENST00000448802 534 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 PLGLA-201ENST00000465668 449 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC093767.1-201ENST00000504523 156 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 OR6C7P-201ENST00000547875 934 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC103987.3-201ENST00000582071 292 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC119751.7-201ENST00000600494 245 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC073544.2-201ENST00000601155 540 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 U73023.1-201ENST00000603134 700 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC064872.1-201ENST00000604823 1072 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 RN7SKP299-201ENST00000606679 301 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 SNORD91B-202ENST00000608459 222 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 AC112484.5-201ENST00000624189 228 ntBASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3DA0A087WVF3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 GDI2P1-201ENST00000429312 1336 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 RPL23AP57-201ENST00000332361 466 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 RNA5SP317-201ENST00000410176 116 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 RN7SKP235-201ENST00000410662 305 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 RNA5SP311-201ENST00000411290 116 ntBASIC4.31□□□□□ -1.72
TBC1D3DA0A087WVF3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms