Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC024341.1-201ENST00000526444 1552 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC103988.1-201ENST00000566382 2177 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 OR1S2-201ENST00000302592 978 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 RPL31P1-201ENST00000398116 372 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AL357075.1-201ENST00000404107 726 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC063979.1-201ENST00000415539 377 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 MRPL50P2-201ENST00000416821 482 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC244098.2-201ENST00000422068 99 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC005326.1-201ENST00000429197 123 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC006028.1-201ENST00000438379 402 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 NECAP1P2-201ENST00000455668 727 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AL590639.1-201ENST00000456484 337 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC068724.1-201ENST00000487100 792 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 RPL21P12-201ENST00000559810 515 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC010653.1-201ENST00000571108 881 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 ZNF415P1-201ENST00000582279 1166 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC115085.1-201ENST00000588924 229 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC078899.3-201ENST00000599065 212 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC012119.1-201ENST00000603184 222 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC015849.2-201ENST00000605738 409 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC107871.2-201ENST00000612894 502 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 MTCO1P8-201ENST00000416914 1523 ntBASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 AC108206.1-201ENST00000570186 4159 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RNU6-1251P-201ENST00000364502 107 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RNA5SP267-201ENST00000364893 126 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 SNORD88.1-201ENST00000408684 91 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RNU4-47P-201ENST00000410876 114 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL139281.1-201ENST00000422120 335 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL158156.1-201ENST00000422509 473 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL390023.1-201ENST00000428836 262 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RPL39P40-201ENST00000445481 146 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC091153.1-201ENST00000466297 402 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RPL23AP11-201ENST00000475260 469 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 GMPSP1-201ENST00000514075 579 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 SEC11B-201ENST00000518383 499 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC245389.2-201ENST00000616023 576 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC138932.5-201ENST00000617759 563 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC243756.2-201ENST00000618406 463 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC242843.1-201ENST00000618702 573 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AC073055.1-201ENST00000456901 1621 ntBASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DRB4X5D2U9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AC002546.1-201ENST00000588041 2504 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AC116096.1-201ENST00000566804 2314 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 MIR23B-201ENST00000384832 97 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 EIF5P1-201ENST00000400019 1231 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL590290.1-201ENST00000405336 380 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL356806.1-201ENST00000422524 916 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL353678.1-201ENST00000422735 741 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AC005300.1-201ENST00000428401 373 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL591503.2-201ENST00000442314 1005 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 AL358232.1-201ENST00000448030 501 ntBASIC2.34□□□□□ -2.03
HLA-DRB4X5D2U9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms