Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC034268.2-201ENST00000571784 482 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC105254.2-201ENST00000603636 436 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AL031320.1-201ENST00000604177 357 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC004853.1-201ENST00000604902 698 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 uc_338.18-201ENST00000615451 175 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC015871.5-202ENST00000623252 701 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC091925.2-201ENST00000625059 256 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 CR381572.1-201ENST00000625098 102 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC010149.2-201ENST00000637608 315 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC099654.12-201ENST00000639868 649 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 AC063976.2-201ENST00000425667 3556 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 IRF5P1-201ENST00000504852 2164 ntBASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA6Q9Y5G7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC092125.1-201ENST00000562568 1995 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 NMD3P1-201ENST00000439704 1488 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RPL7P25-201ENST00000404151 721 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 MIR1271-201ENST00000408537 86 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RNA5SP56-201ENST00000410277 118 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 FCF1P9-201ENST00000412546 282 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AL353777.1-201ENST00000425552 326 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 MTND3P21-201ENST00000433774 331 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 MTCYBP45-201ENST00000435243 565 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC112653.1-201ENST00000443851 386 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC112498.1-201ENST00000444401 332 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 MTND1P1-201ENST00000445453 368 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RN7SL738P-201ENST00000470264 297 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC107401.1-201ENST00000503426 685 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 GAPDHP56-201ENST00000506031 988 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RPL37P25-201ENST00000507308 276 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RNU6-27P-201ENST00000516146 107 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 HMGB3P26-201ENST00000560051 582 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 UBE2FP2-201ENST00000566646 462 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 MIR4270-201ENST00000581799 70 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC121334.2-201ENST00000605387 271 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AP005432.2-201ENST00000608162 586 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AP001521.2-201ENST00000608772 546 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AL161616.1-201ENST00000611867 286 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC009704.2-201ENST00000618739 483 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 PISRT1-201ENST00000626175 531 ntBASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA6Q9Y5G7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.77□□□□□ -1.65
PCDHGA6Q9Y5G7 RNU6-837P-201ENST00000391056 108 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms