Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC107068.1-201ENST00000563286 4218 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RNU6-921P-201ENST00000384361 107 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 MIR105-2-201ENST00000385083 81 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RPS20P2-201ENST00000402520 389 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RN7SKP247-201ENST00000411094 308 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AL589872.1-201ENST00000426602 288 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RPEP2-201ENST00000432149 701 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RPL37P1-201ENST00000432310 284 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 YWHAZP8-201ENST00000436935 731 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 PTMAP6-201ENST00000439110 327 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RPL17P49-201ENST00000443728 411 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC026410.2-201ENST00000460281 156 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RPL23AP56-201ENST00000460778 453 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC090686.1-201ENST00000481577 749 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RN7SL214P-201ENST00000487317 265 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 RN7SL346P-201ENST00000491561 294 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 HMGN1P12-201ENST00000499125 195 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC114786.4-201ENST00000508771 728 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC104986.1-201ENST00000517978 436 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 OR5M2P-201ENST00000529003 936 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AL049839.1-201ENST00000556151 657 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 HSPE1P3-201ENST00000559254 309 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC044860.2-201ENST00000561005 179 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC107954.1-201ENST00000565906 727 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC034268.2-201ENST00000571784 482 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 CYCSP40-201ENST00000575927 294 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 SNORA74C-1-201ENST00000580726 201 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC013244.1-201ENST00000604279 193 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC009237.17-201ENST00000618111 748 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC093648.1-201ENST00000623546 606 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 MIR3662-201ENST00000637030 95 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 THAP12P5-201ENST00000405864 2275 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 INTS6P1-201ENST00000504674 2530 ntBASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB4Q9Y5E5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB4Q9Y5E5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB4Q9Y5E5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDHB4Q9Y5E5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDHB4Q9Y5E5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PCDHB4Q9Y5E5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 HSPA8P17-201ENST00000427029 1382 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 RN7SKP104-201ENST00000362605 328 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 RNA5SP345-201ENST00000410646 108 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TPMTP2-201ENST00000414372 726 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC093414.1-201ENST00000434712 514 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 BTF3P13-201ENST00000513224 490 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 Y_RNA.672-201ENST00000516289 104 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 RNU6-709P-201ENST00000517257 104 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 SOD1P3-201ENST00000518682 454 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AF235103.2-201ENST00000525753 346 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC123904.3-201ENST00000547218 814 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 LARP7P2-201ENST00000575306 125 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC011487.3-201ENST00000593607 453 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AC020910.3-201ENST00000603701 874 ntBASIC5.21□□□□□ -1.58
PCDHB4Q9Y5E5 AL035413.2-201ENST00000604801 525 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms