Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RNU1-130P-201ENST00000363930 160 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SNORA17A-201ENST00000391185 133 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL357139.1-201ENST00000407792 426 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 ANKRD54P1-201ENST00000433115 471 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL954705.1-201ENST00000435277 559 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC005002.2-201ENST00000438228 269 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL162389.1-201ENST00000449233 177 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AKR1D1P1-201ENST00000457236 936 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 U8.22-201ENST00000459141 133 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 U8.21-201ENST00000459536 136 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RPS4XP22-201ENST00000480755 780 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL160314.1-201ENST00000490836 438 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AL390726.5-202ENST00000564800 256 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 MIR6826-201ENST00000617808 98 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SNORA17.5-201ENST00000630429 132 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 LINC01613-201ENST00000561476 2780 ntBASIC6.62□□□□□ -1.35
LHX6Q9UPM6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX6Q9UPM6 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC123769.2-201ENST00000624332 5984 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC110716.2-201ENST00000563865 3945 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RNU6-270P-201ENST00000364131 105 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RNA5SP512-201ENST00000364550 120 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RNA5SP510-201ENST00000364697 99 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 Y_RNA.405-201ENST00000383979 100 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 Y_RNA.451-201ENST00000384200 100 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 Y_RNA.524-201ENST00000384564 100 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 Y_RNA.561-201ENST00000384694 100 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 CEACAMP1-201ENST00000434624 1035 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC127537.2-201ENST00000439258 465 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AL360271.2-201ENST00000447710 161 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 UQCRBP2-201ENST00000447827 297 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC234775.1-201ENST00000454247 670 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RNU6-1211P-201ENST00000459179 105 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RN7SL390P-201ENST00000470634 284 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC009120.1-201ENST00000493458 473 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 Y_RNA.706-201ENST00000516933 99 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RN7SKP11-201ENST00000517018 287 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 EEF1B2P1-201ENST00000567221 672 ntBASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX6Q9UPM6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms