Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC073569.3-201ENST00000619055 682 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC048347.1-201ENST00000624621 427 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 MIR4496-201ENST00000635896 61 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AL512283.1-201ENST00000606756 1384 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AP002088.1-201ENST00000382740 395 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 SNORA51.12-201ENST00000384448 134 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 ATF1P1-201ENST00000406040 927 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 OSTCP5-201ENST00000425293 453 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AL512661.1-201ENST00000434586 1253 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 HMGB1P48-201ENST00000446155 598 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 MRPL35P4-201ENST00000453682 566 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 ATP5F1P7-201ENST00000567330 760 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AC017100.2-201ENST00000584628 355 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AL031985.2-201ENST00000600955 480 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 AL138960.2-201ENST00000625145 535 ntBASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLIP2Q9UDT6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RNU6-1339P-201ENST00000363574 91 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RNU6-55P-201ENST00000411092 107 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RNU6-954P-201ENST00000411355 107 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 NUP35P2-201ENST00000416748 943 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AL158156.1-201ENST00000422509 473 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RPL31P12-201ENST00000422587 358 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 HMGN2P21-201ENST00000447764 270 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC010468.1-201ENST00000461022 817 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RN7SL594P-201ENST00000470590 287 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 CYCSP20-201ENST00000473154 315 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AP000893.1-201ENST00000474462 794 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 SETP6-201ENST00000479329 568 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RNU2-27P-201ENST00000516185 142 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 OR8L1P-201ENST00000534005 955 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 OR6C73P-201ENST00000546432 358 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AL389895.1-201ENST00000554127 252 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC009712.1-201ENST00000564938 316 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC092474.3-201ENST00000603022 568 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC018754.1-201ENST00000607486 925 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC018926.3-201ENST00000618841 406 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC092608.3-201ENST00000625017 386 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 AC017104.5-201ENST00000637647 639 ntBASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP2Q9UDT6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 XPOTP1-201ENST00000443317 2398 ntBASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 MIR30E-201ENST00000362104 92 ntBASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 OR1AA1P-201ENST00000419597 916 ntBASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 AC005019.1-201ENST00000436455 431 ntBASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP2Q9UDT6 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms