Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SETP6-201ENST00000479329 568 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC078918.1-201ENST00000498515 228 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 SCARNA13-201ENST00000516672 275 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL451007.1-201ENST00000595491 289 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL020991.1-201ENST00000612314 373 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL133370.2-201ENST00000619934 439 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 RPL23AP61-201ENST00000623642 466 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC119674.1-212ENST00000641155 993 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CISHQ9NSE2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CISHQ9NSE2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AL645568.2-201ENST00000432815 1337 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CISHQ9NSE2 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 MIR153-1-201ENST00000384914 90 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 MIR483-201ENST00000385070 76 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC004022.2-201ENST00000413824 193 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 RPL7P44-201ENST00000424827 742 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC093156.1-201ENST00000440382 670 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 RNU7-27P-201ENST00000459281 62 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 RPL30P11-201ENST00000495304 339 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC005921.1-201ENST00000510589 286 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 PTP4A1P6-201ENST00000531034 478 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC024153.1-201ENST00000603103 365 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AL355493.4-201ENST00000618530 292 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 AC010338.1-201ENST00000621823 717 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 PLCE1P1-201ENST00000622094 305 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CISHQ9NSE2 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 AL672296.1-201ENST00000427780 2158 ntBASIC3.04□□□□□ -1.92
CISHQ9NSE2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CISHQ9NSE2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CISHQ9NSE2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CISHQ9NSE2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CISHQ9NSE2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC112653.1-201ENST00000443851 386 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 AL136126.1-201ENST00000473603 402 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 RPL23AP44-201ENST00000482216 473 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC118282.1-201ENST00000506408 765 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC111000.2-201ENST00000507775 550 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC119751.1-201ENST00000513357 765 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 AP005212.4-201ENST00000614206 710 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 Z99129.2-201ENST00000619967 314 ntBASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.03□□□□□ -1.92
CISHQ9NSE2 AC092593.1-201ENST00000515413 1815 ntBASIC3.03□□□□□ -1.93
CISHQ9NSE2 MTND5P27-201ENST00000428871 1720 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CISHQ9NSE2 SNORA31-201ENST00000362607 130 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CISHQ9NSE2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 SNORA18.3-201ENST00000384122 132 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 MIR181A2-201ENST00000384863 110 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 MTCO3P31-201ENST00000405526 789 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC004987.3-201ENST00000413879 771 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 RPL21P40-201ENST00000428586 483 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 AL135938.1-201ENST00000443141 297 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 RPL37P6-202ENST00000464216 403 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 OR5D17P-201ENST00000531492 978 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 HPRT1P3-201ENST00000539521 576 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 MTCO2P22-201ENST00000603246 681 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC006254.3-201ENST00000603353 884 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC118273.1-201ENST00000525324 3006 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms