Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Z93242.1-201ENST00000427102 353 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 TXNL1P1-201ENST00000429528 554 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL365396.1-201ENST00000430854 671 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 USP9YP31-201ENST00000431405 881 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 COX6CP18-201ENST00000448769 222 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC010655.1-201ENST00000449336 292 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC104978.1-201ENST00000449387 391 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL591363.1-201ENST00000450091 483 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL122001.1-201ENST00000457027 370 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC108734.3-201ENST00000481241 1165 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 MTCYBP16-201ENST00000509187 1129 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC008885.2-201ENST00000509506 930 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 SNORA70.18-201ENST00000516696 98 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RANP9-201ENST00000519957 271 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AP003461.1-201ENST00000528866 78 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL442163.2-201ENST00000553912 710 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 DUXAP1-201ENST00000556632 463 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 BNIP3P26-201ENST00000600827 554 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AP003973.1-201ENST00000604639 691 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL133507.1-201ENST00000605269 557 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC092653.1-201ENST00000608509 531 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC099669.2-201ENST00000616549 437 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AC068647.1-201ENST00000489539 2265 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RNU6-839P-201ENST00000363347 108 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RNA5SP479-201ENST00000364858 117 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AL356131.1-201ENST00000405826 414 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RNA5SP80-201ENST00000410475 111 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC006960.1-201ENST00000419980 153 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MRPS36P1-201ENST00000421291 307 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 ELOCP10-201ENST00000440624 327 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AL589765.3-201ENST00000446084 462 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MRPS31P2-201ENST00000451581 518 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RPL21P134-201ENST00000453468 483 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RFC5P1-201ENST00000454419 874 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC105313.1-201ENST00000509121 353 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC048346.1-201ENST00000510247 144 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC116353.3-201ENST00000511215 249 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC010486.3-201ENST00000511602 785 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MRPS33P3-201ENST00000513456 322 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC087808.1-201ENST00000520501 361 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AP000619.3-201ENST00000535634 1127 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC084824.1-201ENST00000550917 1005 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MIR4697-201ENST00000582977 78 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 PSMA6P4-201ENST00000603247 718 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 ELOCP34-201ENST00000604436 327 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC010200.2-201ENST00000605098 235 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC018638.7-201ENST00000605836 1114 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 AC026422.1-201ENST00000623961 452 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 CR392039.4-201ENST00000624968 501 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MIR4278-201ENST00000636094 69 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
SIX2Q9NPC8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX2Q9NPC8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL353743.4-201ENST00000422653 1547 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AP000776.1-201ENST00000530032 1663 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC134882.1-201ENST00000603738 1676 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SNORD9-201ENST00000362566 104 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL136116.1-201ENST00000403591 381 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 Z98941.1-201ENST00000407764 100 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms