Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-225P-201ENST00000384613 103 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 EIF5P1-201ENST00000400019 1231 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL031679.1-201ENST00000400616 525 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL078604.1-201ENST00000404609 466 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 TXNP7-201ENST00000406296 293 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AP000534.2-201ENST00000412729 568 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL353777.1-201ENST00000425552 326 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 OR2B7P-201ENST00000429302 934 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 YWHAZP8-201ENST00000436935 731 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC006480.1-201ENST00000449887 378 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 Y_RNA.632-201ENST00000459189 102 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC063943.1-201ENST00000465434 453 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 COPS8P2-201ENST00000473228 627 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RN7SL177P-201ENST00000476596 299 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC058823.1-201ENST00000485315 474 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AP001025.2-201ENST00000490908 477 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 PCBP2P3-201ENST00000509726 843 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC098976.1-201ENST00000513014 541 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 BX510359.5-201ENST00000515651 304 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RN7SKP13-201ENST00000515933 244 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 SNORA40.12-201ENST00000516329 111 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-941P-201ENST00000516346 108 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC090022.1-201ENST00000546569 311 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC020661.2-201ENST00000560114 134 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RPL10P14-201ENST00000565265 298 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC005668.1-201ENST00000571142 476 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 MIR3118-1-201ENST00000581787 76 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC121334.2-201ENST00000605387 271 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC116312.1-201ENST00000606841 314 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC093913.1-201ENST00000614178 329 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC091953.2-201ENST00000623979 160 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 MTND5P42-201ENST00000637720 498 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 CDC27P2-201ENST00000425026 1922 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RPL7P26-201ENST00000333817 754 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 U3.2-201ENST00000362981 210 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 Y_RNA.184-201ENST00000363884 108 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RNA5SP339-201ENST00000390987 122 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RNA5SP487-201ENST00000410186 122 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-1148P-201ENST00000410992 104 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC004987.3-201ENST00000413879 771 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SNRPFP1-201ENST00000414761 252 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC073136.2-201ENST00000417282 849 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AL807761.1-201ENST00000417622 171 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC008280.1-201ENST00000418851 412 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AL355433.1-201ENST00000422804 300 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC119618.1-201ENST00000434191 222 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC233702.1-201ENST00000482905 502 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RN7SL629P-201ENST00000489622 285 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AL049874.2-201ENST00000492636 288 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RN7SL447P-201ENST00000494711 245 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RPS24P16-201ENST00000497294 392 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 PGAM1P13-201ENST00000507497 754 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms