Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 Y_RNA.72-201ENST00000362894 103 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL603766.1-201ENST00000407763 664 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 RNA5SP118-201ENST00000410385 109 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC007390.1-201ENST00000415722 356 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL035410.1-201ENST00000427409 427 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 VTI1BP4-201ENST00000427516 527 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC073069.1-201ENST00000428657 441 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 CYCSP24-201ENST00000445119 316 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 Y_RNA.704-201ENST00000516851 102 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AP003122.4-201ENST00000530980 758 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC013828.2-201ENST00000532487 235 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC087477.6-201ENST00000559595 843 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 BNIP3P23-201ENST00000599655 511 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC245014.2-201ENST00000603689 287 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AL359999.1-201ENST00000604513 294 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC246785.4-201ENST00000605374 287 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 AC112487.2-201ENST00000637950 304 ntBASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BCAS3Q9H6U6 THAP12P5-201ENST00000405864 2275 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC020633.1-201ENST00000468439 2247 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC097504.1-201ENST00000515103 2415 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 SNORD56.2-201ENST00000363242 71 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RNU6-1227P-201ENST00000383981 107 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RNU6-769P-201ENST00000384407 104 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RPS3AP36-201ENST00000398190 775 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 HMGB1P17-201ENST00000403495 628 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RNU6-908P-201ENST00000410160 94 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 BX295541.1-201ENST00000417774 250 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC140479.3-201ENST00000418944 1126 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC233981.1-201ENST00000423224 461 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC002486.1-201ENST00000435098 391 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC132479.1-201ENST00000449160 144 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 SNRPGP6-201ENST00000451124 220 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 C1DP4-201ENST00000455429 424 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC022364.2-201ENST00000457963 554 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RPL39P36-201ENST00000490784 156 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 ENPP7P9-201ENST00000514456 627 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RNU2-46P-201ENST00000517038 113 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RNU6-1003P-201ENST00000517099 105 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RPS3AP23-202ENST00000574601 686 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 CYCSP40-201ENST00000575927 294 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP001180.3-201ENST00000582221 145 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 MIR5096-201ENST00000583713 70 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AL391646.1-201ENST00000603860 190 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AP001836.1-201ENST00000604675 523 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 BNIP3P10-201ENST00000605360 577 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms