Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SERPINE4P-201ENST00000554978 281 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC006130.2-201ENST00000586202 326 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 OR4G1P-201ENST00000588632 938 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC018714.1-201ENST00000605028 208 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 Z98200.1-201ENST00000607298 470 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AP002360.3-201ENST00000607673 710 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL451074.6-201ENST00000608512 729 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RMST_9.1-201ENST00000619945 193 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC067931.1-201ENST00000624190 671 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.7
EBF3Q9H4W6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
EBF3Q9H4W6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
EBF3Q9H4W6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 Y_RNA.303-201ENST00000364998 94 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 Y_RNA.390-201ENST00000383932 102 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RNU6-77P-201ENST00000410554 91 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RN7SKP222-201ENST00000410651 315 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RNU6-575P-201ENST00000411326 105 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RPL7P8-201ENST00000411964 730 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC073136.2-201ENST00000417282 849 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC104651.1-201ENST00000427559 735 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 MTCO1P3-201ENST00000429327 192 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 HMGB1P45-201ENST00000435986 653 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RPL23AP76-201ENST00000441860 458 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 TPMTP4-201ENST00000450749 678 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC022431.1-201ENST00000450941 438 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 DNAJC19P8-201ENST00000452887 259 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 KATNBL1P6-201ENST00000453433 915 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 GAPDHP39-201ENST00000481866 979 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC073522.1-201ENST00000483312 377 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 MTND2P33-201ENST00000506452 1031 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC006499.6-201ENST00000511169 607 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 FABP5P5-201ENST00000515537 406 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC023632.4-201ENST00000517783 191 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AP001317.1-201ENST00000531194 960 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AP000619.3-201ENST00000535634 1127 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 ZNF519P3-201ENST00000557158 1032 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC136619.2-201ENST00000563361 631 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 MIR548S-201ENST00000581352 82 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 BNIP3P26-201ENST00000600827 554 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RNU4-89P-201ENST00000607443 133 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 MIR92B-201ENST00000607575 96 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AP005137.2-201ENST00000609238 400 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC007546.1-201ENST00000619452 559 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AL607023.1-201ENST00000620045 248 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC022509.4-201ENST00000621404 572 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AC007546.2-201ENST00000623996 360 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 RLIMP1-201ENST00000339626 1680 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 CASC19-284ENST00000642142 1868 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 MAPK10-304ENST00000641341 3984 ntBASIC4.4□□□□□ -1.71
EBF3Q9H4W6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.4□□□□□ -1.71
EBF3Q9H4W6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RNA5SP307-201ENST00000362863 116 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RNU1-85P-201ENST00000364127 164 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SNORA62.2-201ENST00000364672 152 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SNORA75-201ENST00000384158 137 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RPL21P65-201ENST00000406094 466 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SNORA11C-201ENST00000408532 129 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC108032.1-201ENST00000416706 207 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms