Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CSPG4P5Q96PW8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CSPG4P5Q96PW8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSPG4P5Q96PW8 AF117829.1-206ENST00000621883 3802 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AL512646.1-201ENST00000269395 1077 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 MIR607-201ENST00000385241 96 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 GTF2IP23-201ENST00000423746 351 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 ZNF965P-201ENST00000432501 817 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 RPL21P112-201ENST00000434403 463 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AL358232.1-201ENST00000448030 501 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AL513343.1-201ENST00000451818 792 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 MRPL35P4-201ENST00000453682 566 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 CIR1P1-201ENST00000524055 1133 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 CKS1BP3-201ENST00000600888 237 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AL354976.1-201ENST00000613843 387 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC025016.1-201ENST00000616746 682 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC091903.1-201ENST00000624322 454 ntBASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSPG4P5Q96PW8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AL389915.1-201ENST00000422463 466 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC005517.2-201ENST00000424673 553 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC005300.1-201ENST00000428401 373 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 YME1L1P1-201ENST00000429435 297 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC068135.1-201ENST00000446164 246 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC091153.1-201ENST00000466297 402 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 RPL32P34-201ENST00000486380 400 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC022784.5-201ENST00000522241 437 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 RN7SL339P-201ENST00000580597 296 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SNRPGP15-201ENST00000600149 222 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AL355802.4-201ENST00000607635 548 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC084757.4-201ENST00000616350 526 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC090617.9-201ENST00000623751 147 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 AC104446.1-201ENST00000613728 1321 ntBASIC3.32□□□□□ -1.88
CSPG4P5Q96PW8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 SNORA7.2-201ENST00000364446 145 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 RNA5SP171-201ENST00000391071 115 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AL357075.1-201ENST00000404107 726 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AC006960.1-201ENST00000419980 153 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 MTND4P24-201ENST00000424002 397 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 RPL23AP15-201ENST00000450202 459 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 SLC31A1P1-201ENST00000451221 567 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 OR5H3P-201ENST00000502817 919 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 WBP1LP4-201ENST00000505043 344 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AP001207.2-201ENST00000519490 539 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AC053481.3-201ENST00000577881 843 ntBASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
CSPG4P5Q96PW8 BNIP3P22-201ENST00000593399 556 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms